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Aliases for SPATA12 Gene

Aliases for SPATA12 Gene

  • Spermatogenesis Associated 12 2 3
  • SRG5 3 4 6
  • Spermatogenesis-Related Protein 5 3 4
  • Spermatogenesis-Associated Protein 12 3

External Ids for SPATA12 Gene

Previous GeneCards Identifiers for SPATA12 Gene

  • GC03P057051

Summaries for SPATA12 Gene

GeneCards Summary for SPATA12 Gene

SPATA12 (Spermatogenesis Associated 12) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPATA12 Gene

Genomics for SPATA12 Gene

Regulatory Elements for SPATA12 Gene

Genomic Location for SPATA12 Gene

Start:
57,060,441 bp from pter
End:
57,075,432 bp from pter
Size:
14,992 bases
Orientation:
Plus strand

Genomic View for SPATA12 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPATA12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPATA12 Gene

Proteins for SPATA12 Gene

  • Protein details for SPATA12 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7Z6I5-SPT12_HUMAN
    Recommended name:
    Spermatogenesis-associated protein 12
    Protein Accession:
    Q7Z6I5
    Secondary Accessions:
    • A0AVA8
    • B2RMW1

    Protein attributes for SPATA12 Gene

    Size:
    190 amino acids
    Molecular mass:
    20418 Da
    Quaternary structure:
    No Data Available

neXtProt entry for SPATA12 Gene

Proteomics data for SPATA12 Gene at MOPED

Post-translational modifications for SPATA12 Gene

No Post-translational modifications

Other Protein References for SPATA12 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for SPATA12 Gene

Domains for SPATA12 Gene

Protein Domains for SPATA12 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for SPATA12 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPATA12: view

No data available for Gene Families and UniProtKB/Swiss-Prot for SPATA12 Gene

Function for SPATA12 Gene

Animal Model Products

CRISPR Products

miRNA for SPATA12 Gene

miRTarBase miRNAs that target SPATA12

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SPATA12

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for SPATA12 Gene

Localization for SPATA12 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SPATA12 Gene COMPARTMENTS Subcellular localization image for SPATA12 gene
Compartment Confidence
cytosol 2
extracellular 2
nucleus 2
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SPATA12 Gene

Pathways for SPATA12 Gene

SuperPathways for SPATA12 Gene

No Data Available

Interacting Proteins for SPATA12 Gene

Gene Ontology (GO) - Biological Process for SPATA12 Gene

None

No data available for Pathways by source for SPATA12 Gene

Transcripts for SPATA12 Gene

mRNA/cDNA for SPATA12 Gene

(18) Selected AceView cDNA sequences:
(2) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPATA12 Gene

Spermatogenesis associated 12:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SPATA12

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for SPATA12
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SPATA12 Gene

No ASD Table

Relevant External Links for SPATA12 Gene

GeneLoc Exon Structure for
SPATA12
ECgene alternative splicing isoforms for
SPATA12

Expression for SPATA12 Gene

mRNA expression in normal human tissues for SPATA12 Gene

mRNA differential expression in normal tissues according to GTEx for SPATA12 Gene

This gene is overexpressed in Testis (46.2).

SOURCE GeneReport for Unigene cluster for SPATA12 Gene Hs.129794

mRNA Expression by UniProt/SwissProt for SPATA12 Gene

Q7Z6I5-SPT12_HUMAN
Tissue specificity: Expressed in testis.
genes like me logo Genes that share expressions with SPATA12: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and Protein expression for SPATA12 Gene

Orthologs for SPATA12 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for SPATA12 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SPATA12 35
  • 98.6 (n)
  • 96.84 (a)
SPATA12 36
  • 97 (a)
OneToOne
Species with no ortholog for SPATA12:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPATA12 Gene

ENSEMBL:
Gene Tree for SPATA12 (if available)
TreeFam:
Gene Tree for SPATA12 (if available)

Paralogs for SPATA12 Gene

No data available for Paralogs for SPATA12 Gene

Variants for SPATA12 Gene

Structural Variations from Database of Genomic Variants (DGV) for SPATA12 Gene

Variant ID Type Subtype PubMed ID
nsv876819 CNV Gain 21882294

Relevant External Links for SPATA12 Gene

HapMap Linkage Disequilibrium report
SPATA12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SPATA12 Gene

Disorders for SPATA12 Gene

No disorders were found for SPATA12 Gene.

No data available for UniProtKB/Swiss-Prot for SPATA12 Gene

Publications for SPATA12 Gene

  1. Identification and expression of a novel human testis-specific gene by digital differential display. (PMID: 15603706) Li D. … Lu G.X. (Chin. Med. J. 2004) 3 4 23
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Molecular cloning and expression analysis of a novel human testis- specific gene. (PMID: 15490870) Li D. … Liu G. (Yi Chuan Xue Bao 2004) 3 4
  4. Expression and possible functions of a novel gene SPATA12 in human testis. (PMID: 17251597) Dan L. … Guangxiu L. (J. Androl. 2007) 2 3
  5. Transcriptional regulation of human novel gene SPATA12 promoter by AP-1 and HSF. (PMID: 22981541) Li D. … Liu X. (Gene 2012) 2 3

Products for SPATA12 Gene

Sources for SPATA12 Gene

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