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Aliases for SPAG5-AS1 Gene

Subcategory (RNA class) for SPAG5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SPAG5-AS1 Gene

  • SPAG5 Antisense RNA 1 2 3 5
  • SPAG5 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SPAG5-AS1 Gene

Previous GeneCards Identifiers for SPAG5-AS1 Gene

  • GC17P026932
  • GC17P026937

Summaries for SPAG5-AS1 Gene

GeneCards Summary for SPAG5-AS1 Gene

SPAG5-AS1 (SPAG5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPAG5-AS1 Gene

Genomics for SPAG5-AS1 Gene

Regulatory Elements for SPAG5-AS1 Gene

Enhancers for SPAG5-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around SPAG5-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SPAG5-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for SPAG5-AS1 Gene

28,598,790 bp from pter
28,617,377 bp from pter
18,588 bases
Plus strand

Genomic View for SPAG5-AS1 Gene

Genes around SPAG5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPAG5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPAG5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPAG5-AS1 Gene

Proteins for SPAG5-AS1 Gene

Post-translational modifications for SPAG5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPAG5-AS1 Gene

Domains & Families for SPAG5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPAG5-AS1 Gene

Function for SPAG5-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SPAG5-AS1 Gene

Localization for SPAG5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPAG5-AS1 Gene

Pathways & Interactions for SPAG5-AS1 Gene

SuperPathways for SPAG5-AS1 Gene

No Data Available

Interacting Proteins for SPAG5-AS1 Gene

Gene Ontology (GO) - Biological Process for SPAG5-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SPAG5-AS1 Gene

Drugs & Compounds for SPAG5-AS1 Gene

No Compound Related Data Available

Transcripts for SPAG5-AS1 Gene

mRNA/cDNA for SPAG5-AS1 Gene

(3) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPAG5-AS1 Gene

SPAG5 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPAG5-AS1 Gene

No ASD Table

Relevant External Links for SPAG5-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SPAG5-AS1 Gene

mRNA expression in normal human tissues for SPAG5-AS1 Gene

SOURCE GeneReport for Unigene cluster for SPAG5-AS1 Gene:

genes like me logo Genes that share expression patterns with SPAG5-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SPAG5-AS1 Gene

Orthologs for SPAG5-AS1 Gene

Evolution for SPAG5-AS1 Gene

Gene Tree for SPAG5-AS1 (if available)
Gene Tree for SPAG5-AS1 (if available)

No data available for Orthologs for SPAG5-AS1 Gene

Paralogs for SPAG5-AS1 Gene

No data available for Paralogs for SPAG5-AS1 Gene

Variants for SPAG5-AS1 Gene

Sequence variations from dbSNP and Humsavar for SPAG5-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs652884 -- 28,602,845(-) tggga(A/G)gccaa intron-variant
rs7217274 -- 28,603,661(+) ttaac(A/G)agcat intron-variant
rs7215306 -- 28,603,520(+) tcgca(A/G)agggg intron-variant
rs9890687 -- 28,601,345(+) tcacc(A/G)tgtta intron-variant
rs9904905 -- 28,603,805(+) cagaa(A/G/T)aattt intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SPAG5-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv1064087 CNV gain 25217958
nsv482200 CNV loss 20164927

Relevant External Links for SPAG5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SPAG5-AS1 Gene

Disorders for SPAG5-AS1 Gene

Relevant External Links for SPAG5-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SPAG5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPAG5-AS1 Gene

Publications for SPAG5-AS1 Gene

No publications were found for SPAG5-AS1 Gene.

Products for SPAG5-AS1 Gene

Sources for SPAG5-AS1 Gene

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