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Aliases for SPAG11A Gene

Aliases for SPAG11A Gene

  • Sperm Associated Antigen 11A 2 3 5
  • Human Epididymis-Specific Protein 2 3 4
  • Epididymal Protein 2A 2 3
  • Sperm Antigen HE2 3 4
  • HE2 3 4
  • Protein EP2 4
  • EDDM2A 3
  • EP2 4

External Ids for SPAG11A Gene

Previous GeneCards Identifiers for SPAG11A Gene

  • GC08P007745
  • GC08P007705

Summaries for SPAG11A Gene

GeneCards Summary for SPAG11A Gene

SPAG11A (Sperm Associated Antigen 11A) is a Protein Coding gene. An important paralog of this gene is SPAG11B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPAG11A Gene

Genomics for SPAG11A Gene

Regulatory Elements for SPAG11A Gene

Genomic Location for SPAG11A Gene

Chromosome:
8
Start:
7,847,864 bp from pter
End:
7,868,867 bp from pter
Size:
21,004 bases
Orientation:
Plus strand

Genomic View for SPAG11A Gene

Genes around SPAG11A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SPAG11A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SPAG11A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPAG11A Gene

Proteins for SPAG11A Gene

  • Protein details for SPAG11A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6PDA7-SG11A_HUMAN
    Recommended name:
    Sperm-associated antigen 11A
    Protein Accession:
    Q6PDA7
    Secondary Accessions:
    • A6NIY0
    • E9PAK7

    Protein attributes for SPAG11A Gene

    Size:
    123 amino acids
    Molecular mass:
    13842 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AC130365; Type=Erroneous termination; Positions=104; Note=Translated as Glu.; Evidence={ECO:0000305};

    Alternative splice isoforms for SPAG11A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for SPAG11A Gene

Proteomics data for SPAG11A Gene at MOPED

Post-translational modifications for SPAG11A Gene

No data available for DME Specific Peptides for SPAG11A Gene

Domains & Families for SPAG11A Gene

Protein Domains for SPAG11A Gene

Blocks:
InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for SPAG11A Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6PDA7

UniProtKB/Swiss-Prot:

SG11A_HUMAN :
  • Belongs to the SPAG11 family.
Family:
  • Belongs to the SPAG11 family.
genes like me logo Genes that share domains with SPAG11A: view

No data available for Gene Families for SPAG11A Gene

Function for SPAG11A Gene

Phenotypes for SPAG11A Gene

GenomeRNAi human phenotypes for SPAG11A:
genes like me logo Genes that share phenotypes with SPAG11A: view

Animal Model Products

  • Taconic Biosciences Mouse Models for SPAG11A

CRISPR Products

miRNA for SPAG11A Gene

miRTarBase miRNAs that target SPAG11A

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for SPAG11A Gene

Localization for SPAG11A Gene

Subcellular locations from UniProtKB/Swiss-Prot for SPAG11A Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for SPAG11A Gene COMPARTMENTS Subcellular localization image for SPAG11A gene
Compartment Confidence
extracellular 5
cytosol 1
lysosome 1
vacuole 1

No data available for Gene Ontology (GO) - Cellular Components for SPAG11A Gene

Pathways & Interactions for SPAG11A Gene

SuperPathways for SPAG11A Gene

No Data Available

Interacting Proteins for SPAG11A Gene

Gene Ontology (GO) - Biological Process for SPAG11A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SPAG11A Gene

Drugs & Compounds for SPAG11A Gene

No Compound Related Data Available

Transcripts for SPAG11A Gene

mRNA/cDNA for SPAG11A Gene

(4) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SPAG11A Gene

Sperm associated antigen 11A:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SPAG11A Gene

No ASD Table

Relevant External Links for SPAG11A Gene

GeneLoc Exon Structure for
SPAG11A
ECgene alternative splicing isoforms for
SPAG11A

Expression for SPAG11A Gene

mRNA expression in normal human tissues for SPAG11A Gene

Protein differential expression in normal tissues from HIPED for SPAG11A Gene

This gene is overexpressed in Plasma (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for SPAG11A Gene



SOURCE GeneReport for Unigene cluster for SPAG11A Gene Hs.559506

genes like me logo Genes that share expression patterns with SPAG11A: view

Protein tissue co-expression partners for SPAG11A Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for SPAG11A Gene

Orthologs for SPAG11A Gene

This gene was present in the common ancestor of mammals.

Orthologs for SPAG11A Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SPAG11 36
  • 27 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SPAG11 36
  • 37 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Spag11b 36
  • 38 (a)
OneToMany
Species with no ortholog for SPAG11A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SPAG11A Gene

ENSEMBL:
Gene Tree for SPAG11A (if available)
TreeFam:
Gene Tree for SPAG11A (if available)

Paralogs for SPAG11A Gene

Paralogs for SPAG11A Gene

genes like me logo Genes that share paralogs with SPAG11A: view

Variants for SPAG11A Gene

Sequence variations from dbSNP and Humsavar for SPAG11A Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs12063 -- 7,860,665(+) GGAAT(A/G/T)AGAAA reference, missense, stop-lost
rs1071601 -- 7,860,393(+) ATCTG(A/C/T)GTGGG intron-variant, reference, synonymous-codon, stop-gained
rs1071602 -- 7,860,658(+) TCCAC(A/C/T)GGGAA reference, synonymous-codon, missense
rs2740701 -- 7,846,217(+) TAAAT(A/T)ATTTC upstream-variant-2KB
rs2740713 -- 7,852,582(+) tccgc(C/G)tcggc intron-variant

Structural Variations from Database of Genomic Variants (DGV) for SPAG11A Gene

Variant ID Type Subtype PubMed ID
nsv428194 CNV Gain+Loss 18775914
dgv2191e1 CNV Complex 17122850
nsv515968 CNV Gain+Loss 19592680
nsv821656 CNV Gain 15273396
dgv2192e1 CNV Complex 17122850
nsv510977 CNV Complex 20534489
dgv7659n71 CNV Gain 21882294
esv33606 CNV Gain+Loss 17666407
dgv7662n71 CNV Gain 21882294
nsv8281 CNV Gain+Loss 18304495
dgv7664n71 CNV Loss 21882294
nsv471650 CNV Gain+Loss 15918152
dgv2195e1 CNV Complex 17122850
dgv7669n71 CNV Gain 21882294
dgv7670n71 CNV Loss 21882294
dgv7673n71 CNV Gain+Loss 21882294
esv2752265 CNV Gain 17911159
nsv442397 CNV CNV 18776908
dgv7679n71 CNV Gain 21882294
esv2752266 CNV Loss 17911159
nsv508496 CNV Loss 20534489
dgv7682n71 CNV Gain 21882294
esv25631 CNV Gain+Loss 19812545
nsv890256 CNV Gain+Loss 21882294
dgv7683n71 CNV Gain+Loss 21882294
dgv7684n71 CNV Loss 21882294
dgv7685n71 CNV Gain 21882294
nsv890270 CNV Loss 21882294
dgv7686n71 CNV Gain 21882294
dgv7687n71 CNV Gain 21882294
esv992071 CNV Gain 20482838
dgv7688n71 CNV Gain 21882294
dgv7689n71 CNV Gain 21882294
nsv433398 CNV Gain 18776910
dgv7690n71 CNV Gain+Loss 21882294
dgv7691n71 CNV Gain 21882294
dgv26n31 CNV Duplication 19718026
dgv1170n67 CNV Loss 20364138
nsv824524 CNV Gain+Loss 20364138
dgv7692n71 CNV Gain 21882294
dgv7693n71 CNV Gain+Loss 21882294
dgv7694n71 CNV Loss 21882294
dgv7695n71 CNV Gain 21882294
nsv890300 CNV Loss 21882294
dgv7696n71 CNV Gain 21882294
nsv471458 CNV Duplication 19718026
nsv482120 CNV Gain 20164927
nsv890317 CNV Gain+Loss 21882294
dgv7697n71 CNV Gain 21882294

Relevant External Links for SPAG11A Gene

HapMap Linkage Disequilibrium report
SPAG11A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SPAG11A Gene

Disorders for SPAG11A Gene

Relevant External Links for SPAG11A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SPAG11A

No disorders were found for SPAG11A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SPAG11A Gene

Publications for SPAG11A Gene

  1. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 3 4 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Organization of the human gene encoding the epididymis-specific EP2 protein variants and its relationship to defensin genes. (PMID: 11259252) Frohlich O. … Young L.G. (Biol. Reprod. 2001) 3
  4. HE2 beta and HE2 gamma, new members of an epididymis-specific family of androgen-regulated proteins in the human. (PMID: 10698202) Hamil K.G. … Hall S.H. (Endocrinology 2000) 3
  5. Molecular cloning and characterization of a novel human sperm antigen (HE2) specifically expressed in the proximal epididymis. (PMID: 8167223) Osterhoff C. … Ivell R. (Biol. Reprod. 1994) 3

Products for SPAG11A Gene

Sources for SPAG11A Gene

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