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Aliases for SPACA6P-AS Gene

Subcategory (RNA class) for SPACA6P-AS Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for SPACA6P-AS Gene

  • SPACA6P Antisense RNA 2 3
  • Long Intergenic Non-Protein Coding RNA 1129 2 3
  • LINC01129 3

External Ids for SPACA6P-AS Gene

ORGUL Members for SPACA6P-AS Gene

Previous HGNC Symbols for SPACA6P-AS Gene

  • LINC01129

Previous GeneCards Identifiers for SPACA6P-AS Gene

  • GC19M052193

Summaries for SPACA6P-AS Gene

GeneCards Summary for SPACA6P-AS Gene

SPACA6P-AS (SPACA6P Antisense RNA) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SPACA6P-AS Gene

Genomics for SPACA6P-AS Gene

Genomic Location for SPACA6P-AS Gene

Start:
51,685,363 bp from pter
End:
51,693,456 bp from pter
Size:
8,094 bases
Orientation:
Minus strand

Genomic View for SPACA6P-AS Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SPACA6P-AS Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SPACA6P-AS Gene

No data available for Regulatory Elements for SPACA6P-AS Gene

Proteins for SPACA6P-AS Gene

Post-translational modifications for SPACA6P-AS Gene

No Post-translational modifications

No data available for DME Specific Peptides for SPACA6P-AS Gene

Domains for SPACA6P-AS Gene

Gene Families for SPACA6P-AS Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SPACA6P-AS: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SPACA6P-AS Gene

Function for SPACA6P-AS Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SPACA6P-AS Gene

Localization for SPACA6P-AS Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SPACA6P-AS Gene

Pathways for SPACA6P-AS Gene

SuperPathways for SPACA6P-AS Gene

No Data Available

Interacting Proteins for SPACA6P-AS Gene

Gene Ontology (GO) - Biological Process for SPACA6P-AS Gene

None

No data available for Pathways by source for SPACA6P-AS Gene

Transcripts for SPACA6P-AS Gene

mRNA/cDNA for SPACA6P-AS Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SPACA6P-AS Gene

No ASD Table

Relevant External Links for SPACA6P-AS Gene

GeneLoc Exon Structure for
SPACA6P-AS
ECgene alternative splicing isoforms for
SPACA6P-AS

Expression for SPACA6P-AS Gene

mRNA expression in normal human tissues for SPACA6P-AS Gene

mRNA differential expression in normal tissues according to GTEx for SPACA6P-AS Gene

This gene is overexpressed in Testis (5.9) and Adipose - Visceral (Omentum) (5.3).
genes like me logo Genes that share expressions with SPACA6P-AS: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for SPACA6P-AS Gene

Orthologs for SPACA6P-AS Gene

Evolution for SPACA6P-AS Gene

ENSEMBL:
Gene Tree for SPACA6P-AS (if available)
TreeFam:
Gene Tree for SPACA6P-AS (if available)

No data available for Orthologs for SPACA6P-AS Gene

Paralogs for SPACA6P-AS Gene

No data available for Paralogs for SPACA6P-AS Gene

Variants for SPACA6P-AS Gene

Sequence variations from dbSNP and Humsavar for SPACA6P-AS Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs882105 -- 51,690,611(+) GGAGG(A/G)GGACC intron-variant
rs10405559 -- 51,687,867(+) TCCCG(C/T)CCACA nc-transcript-variant
rs10410246 -- 51,685,049(+) GTGCC(A/G)CCTGT downstream-variant-500B
rs11084108 -- 51,687,306(+) ACATA(A/C)GCAAA nc-transcript-variant
rs11415588 -- 51,687,489(+) AAAAA(-/A)CCAAG nc-transcript-variant

Relevant External Links for SPACA6P-AS Gene

HapMap Linkage Disequilibrium report
SPACA6P-AS

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SPACA6P-AS Gene

Disorders for SPACA6P-AS Gene

No disorders were found for SPACA6P-AS Gene.

No data available for UniProtKB/Swiss-Prot for SPACA6P-AS Gene

Publications for SPACA6P-AS Gene

No publications were found for SPACA6P-AS Gene.

Products for SPACA6P-AS Gene

Sources for SPACA6P-AS Gene

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