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Aliases for SOX5P1 Gene

Aliases for SOX5P1 Gene

  • SRY-Box 5 Pseudogene 1 2 3 5
  • SRY (Sex Determining Region Y)-Box 5 Pseudogene 2 3
  • SRY Box 5 Pseudogene 1 2 3
  • SOX5 Pseudogene 3
  • SOX29 3
  • SOX5P 3

External Ids for SOX5P1 Gene

Previous HGNC Symbols for SOX5P1 Gene

  • SOX5P

Summaries for SOX5P1 Gene

GeneCards Summary for SOX5P1 Gene

SOX5P1 (SRY-Box 5 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOX5P1 Gene

Genomics for SOX5P1 Gene

Regulatory Elements for SOX5P1 Gene

Enhancers for SOX5P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SOX5P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SOX5P1 Gene

Chromosome:
8
Start:
87,788,235 bp from pter
End:
87,789,688 bp from pter
Size:
1,454 bases
Orientation:
Minus strand

Genomic View for SOX5P1 Gene

Genes around SOX5P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOX5P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOX5P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOX5P1 Gene

Proteins for SOX5P1 Gene

Post-translational modifications for SOX5P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOX5P1 Gene

Domains & Families for SOX5P1 Gene

Suggested Antigen Peptide Sequences for SOX5P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SOX5P1 Gene

Function for SOX5P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOX5P1 Gene

Localization for SOX5P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOX5P1 Gene

Pathways & Interactions for SOX5P1 Gene

SuperPathways for SOX5P1 Gene

No Data Available

Interacting Proteins for SOX5P1 Gene

Gene Ontology (GO) - Biological Process for SOX5P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SOX5P1 Gene

Drugs & Compounds for SOX5P1 Gene

No Compound Related Data Available

Transcripts for SOX5P1 Gene

mRNA/cDNA for SOX5P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOX5P1 Gene

No ASD Table

Relevant External Links for SOX5P1 Gene

GeneLoc Exon Structure for
SOX5P1
ECgene alternative splicing isoforms for
SOX5P1

Expression for SOX5P1 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SOX5P1 Gene

Orthologs for SOX5P1 Gene

Evolution for SOX5P1 Gene

ENSEMBL:
Gene Tree for SOX5P1 (if available)
TreeFam:
Gene Tree for SOX5P1 (if available)

No data available for Orthologs for SOX5P1 Gene

Paralogs for SOX5P1 Gene

No data available for Paralogs for SOX5P1 Gene

Variants for SOX5P1 Gene

Relevant External Links for SOX5P1 Gene

HapMap Linkage Disequilibrium report
SOX5P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOX5P1 Gene

Disorders for SOX5P1 Gene

No disorders were found for SOX5P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOX5P1 Gene

Publications for SOX5P1 Gene

  1. Cloning and characterization of SOX5, a new member of the human SOX gene family. (PMID: 8812465) Wunderle V.M. … Goodfellow P.N. (Genomics 1996) 2 3 23 67
  2. Twenty pairs of sox: extent, homology, and nomenclature of the mouse and human sox transcription factor gene families. (PMID: 12194848) Schepers G.E. … Koopman P. (Dev. Cell 2002) 2 3
  3. Further complexity of the human SOX gene family revealed by the combined use of highly degenerate primers and nested PCR. (PMID: 9827568) Cremazy F. … Jay P. (FEBS Lett. 1998) 3

Products for SOX5P1 Gene

Sources for SOX5P1 Gene

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