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Aliases for SOX5P Gene

Aliases for SOX5P Gene

  • SRY (Sex Determining Region Y)-Box 5 Pseudogene 2 3
  • SOX5 Pseudogene 3
  • SOX29 3

External Ids for SOX5P Gene

Previous GeneCards Identifiers for SOX5P Gene

  • GC08U990059
  • GC08M088469
  • GC08M088756
  • GC08M088869

Summaries for SOX5P Gene

GeneCards Summary for SOX5P Gene

SOX5P (SRY (Sex Determining Region Y)-Box 5 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOX5P Gene

Genomics for SOX5P Gene

Genomic Location for SOX5P Gene

Start:
87,788,235 bp from pter
End:
87,789,688 bp from pter
Size:
1,454 bases
Orientation:
Minus strand

Genomic View for SOX5P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SOX5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOX5P Gene

No data available for Regulatory Elements for SOX5P Gene

Proteins for SOX5P Gene

Post-translational modifications for SOX5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOX5P Gene

Domains for SOX5P Gene

Suggested Antigen Peptide Sequences for SOX5P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for SOX5P Gene

Function for SOX5P Gene

Molecular function for SOX5P Gene

GENATLAS Biochemistry: SRY related HMG box gene 5,pseudogene,modulator of LINE retroposons promoter activity

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SOX5P Gene

Localization for SOX5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOX5P Gene

Pathways for SOX5P Gene

SuperPathways for SOX5P Gene

No Data Available

Interacting Proteins for SOX5P Gene

Gene Ontology (GO) - Biological Process for SOX5P Gene

None

No data available for Pathways by source for SOX5P Gene

Transcripts for SOX5P Gene

mRNA/cDNA for SOX5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOX5P Gene

No ASD Table

Relevant External Links for SOX5P Gene

GeneLoc Exon Structure for
SOX5P
ECgene alternative splicing isoforms for
SOX5P

Expression for SOX5P Gene

mRNA expression in normal human tissues for SOX5P Gene

genes like me logo Genes that share expressions with SOX5P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SOX5P Gene

Orthologs for SOX5P Gene

Evolution for SOX5P Gene

ENSEMBL:
Gene Tree for SOX5P (if available)
TreeFam:
Gene Tree for SOX5P (if available)

No data available for Orthologs for SOX5P Gene

Paralogs for SOX5P Gene

Selected SIMAP similar genes for SOX5P Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with SOX5P: view

No data available for Paralogs for SOX5P Gene

Variants for SOX5P Gene

Relevant External Links for SOX5P Gene

HapMap Linkage Disequilibrium report
SOX5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for SOX5P Gene

Disorders for SOX5P Gene

No disorders were found for SOX5P Gene.

No data available for UniProtKB/Swiss-Prot for SOX5P Gene

Publications for SOX5P Gene

  1. Cloning and characterization of SOX5, a new member of the human SOX gene family. (PMID: 8812465) Wunderle V.M. … Goodfellow P.N. (Genomics 1996) 2 3 23
  2. Twenty pairs of sox: extent, homology, and nomenclature of the mouse and human sox transcription factor gene families. (PMID: 12194848) Schepers G.E. … Koopman P. (Dev. Cell 2002) 2 3
  3. Further complexity of the human SOX gene family revealed by the combined use of highly degenerate primers and nested PCR. (PMID: 9827568) Cremazy F. … Jay P. (FEBS Lett. 1998) 3

Products for SOX5P Gene

Sources for SOX5P Gene

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