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Aliases for SOX30P1 Gene

Aliases for SOX30P1 Gene

  • SRY-Box 30 Pseudogene 1 2 3
  • SRY (Sex Determining Region Y)-Box 30 Pseudogene 1 2
  • SRY Box 30 Pseudogene 1 2
  • AC008694.3 5

External Ids for SOX30P1 Gene

Previous GeneCards Identifiers for SOX30P1 Gene

  • GC00U931380
  • GC05U901516
  • GC05M157110

Summaries for SOX30P1 Gene

GeneCards Summary for SOX30P1 Gene

SOX30P1 (SRY-Box 30 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOX30P1 Gene

Genomics for SOX30P1 Gene

Regulatory Elements for SOX30P1 Gene

Enhancers for SOX30P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G157686 0.2 ENCODE 6.1 +4.4 4368 1.3 C5orf52 SOX30P1 SOX30 PIR54404 GC05M157689
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SOX30P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SOX30P1 Gene

Chromosome:
5
Start:
157,682,985 bp from pter
End:
157,691,236 bp from pter
Size:
8,252 bases
Orientation:
Minus strand

Genomic View for SOX30P1 Gene

Genes around SOX30P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOX30P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOX30P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOX30P1 Gene

Proteins for SOX30P1 Gene

Post-translational modifications for SOX30P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOX30P1 Gene

Domains & Families for SOX30P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SOX30P1 Gene

Function for SOX30P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOX30P1 Gene

Localization for SOX30P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOX30P1 Gene

Pathways & Interactions for SOX30P1 Gene

SuperPathways for SOX30P1 Gene

No Data Available

Interacting Proteins for SOX30P1 Gene

Gene Ontology (GO) - Biological Process for SOX30P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SOX30P1 Gene

Drugs & Compounds for SOX30P1 Gene

No Compound Related Data Available

Transcripts for SOX30P1 Gene

mRNA/cDNA for SOX30P1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOX30P1 Gene

No ASD Table

Relevant External Links for SOX30P1 Gene

GeneLoc Exon Structure for
SOX30P1
ECgene alternative splicing isoforms for
SOX30P1

Expression for SOX30P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SOX30P1 Gene

mRNA differential expression in normal tissues according to GTEx for SOX30P1 Gene

This gene is overexpressed in Testis (x52.9).

NURSA nuclear receptor signaling pathways regulating expression of SOX30P1 Gene:

SOX30P1
genes like me logo Genes that share expression patterns with SOX30P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SOX30P1 Gene

Orthologs for SOX30P1 Gene

Evolution for SOX30P1 Gene

ENSEMBL:
Gene Tree for SOX30P1 (if available)
TreeFam:
Gene Tree for SOX30P1 (if available)

No data available for Orthologs for SOX30P1 Gene

Paralogs for SOX30P1 Gene

No data available for Paralogs for SOX30P1 Gene

Variants for SOX30P1 Gene

Relevant External Links for SOX30P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SOX30P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOX30P1 Gene

Disorders for SOX30P1 Gene

No disorders were found for SOX30P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOX30P1 Gene

Publications for SOX30P1 Gene

No publications were found for SOX30P1 Gene.

Products for SOX30P1 Gene

Sources for SOX30P1 Gene

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