Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SOS1-IT1 Gene

Subcategory (RNA class) for SOS1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SOS1-IT1 Gene

  • SOS1 Intronic Transcript 1 2 3 5
  • SOS1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for SOS1-IT1 Gene

Previous GeneCards Identifiers for SOS1-IT1 Gene

  • GC02M039221

Summaries for SOS1-IT1 Gene

GeneCards Summary for SOS1-IT1 Gene

SOS1-IT1 (SOS1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOS1-IT1 Gene

Genomics for SOS1-IT1 Gene

Regulatory Elements for SOS1-IT1 Gene

Enhancers for SOS1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F038997 1.1 Ensembl ENCODE 0.8 -3.9 -3890 1.2 MAFG BACH1 ZNF316 JUND MAFF NFE2 FOXP2 FOS MAFK EMSY DHX57 MORN2 SOS1 SOS1-IT1 GC02M039015
GH02F038978 0.4 Ensembl 0.4 +15.0 14957 0.6 ZBTB33 SPI1 SOS1 SOS1-IT1 LOC375196
GH02F038959 0.4 ENCODE 0.3 +33.3 33326 1.3 RING1 CTCF RNF2 POLR2A NRF1 BHLHE40 MAX ASS1P2 DHX57 MORN2 SOS1 LOC375196 SOS1-IT1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SOS1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SOS1-IT1 Gene

38,992,279 bp from pter
38,993,857 bp from pter
1,579 bases
Minus strand

Genomic View for SOS1-IT1 Gene

Genes around SOS1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOS1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOS1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SOS1-IT1 Gene

Proteins for SOS1-IT1 Gene

Post-translational modifications for SOS1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOS1-IT1 Gene

Domains & Families for SOS1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SOS1-IT1 Gene

Function for SOS1-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOS1-IT1 Gene

Localization for SOS1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOS1-IT1 Gene

Pathways & Interactions for SOS1-IT1 Gene

SuperPathways for SOS1-IT1 Gene

No Data Available

Interacting Proteins for SOS1-IT1 Gene

Gene Ontology (GO) - Biological Process for SOS1-IT1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SOS1-IT1 Gene

Transcripts for SOS1-IT1 Gene

mRNA/cDNA for SOS1-IT1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOS1-IT1 Gene

No ASD Table

Relevant External Links for SOS1-IT1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SOS1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SOS1-IT1 Gene

genes like me logo Genes that share expression patterns with SOS1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SOS1-IT1 Gene

Orthologs for SOS1-IT1 Gene

Evolution for SOS1-IT1 Gene

Gene Tree for SOS1-IT1 (if available)
Gene Tree for SOS1-IT1 (if available)

No data available for Orthologs for SOS1-IT1 Gene

Paralogs for SOS1-IT1 Gene

No data available for Paralogs for SOS1-IT1 Gene

Variants for SOS1-IT1 Gene

Relevant External Links for SOS1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOS1-IT1 Gene

Disorders for SOS1-IT1 Gene

No disorders were found for SOS1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOS1-IT1 Gene

Publications for SOS1-IT1 Gene

  1. Shotgun sequencing of the human transcriptome with ORF expressed sequence tags. (PMID: 10737800) Dias Neto E. … Simpson A.J.G. (Proc. Natl. Acad. Sci. U.S.A. 2000) 3 64

Products for SOS1-IT1 Gene

Sources for SOS1-IT1 Gene

Loading form....