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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SORBS3 Gene

protein-coding   GIFtS: 54
GCID: GC08P022409

sorbin and SH3 domain containing 3

 Explore 2 diseases affiliated with
SORBS3 via our new
 Human Malady Compendium 
Biological research products
for SORBS3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Sorbin And SH3 Domain Containing 31 2     Vinexin1
SCAM-11 2 3     Sorbin And SH3 Domain-Containing Protein 32 3
SH3D41 2 5     Vinexin Beta (SH3-Containing Adaptor Molecule-1)2
SCAM12 3 5     SH3-Containing Adapter Molecule 13

External Ids:    HGNC: 309071   Entrez Gene: 101742   Ensembl: ENSG000001208967   OMIM: 6107955   UniProtKB: O605043   

Export aliases for SORBS3 gene to outside databases

Previous GC identifers: GC08P022466 GC08P020951


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SORBS3:
This gene encodes an SH3 domain-containing adaptor protein. The presence of SH3 domains play a role in this protein's
ability to bind other cytoplasmic molecules and contribute to cystoskeletal organization, cell adhesion and migration,
signaling, and gene expression. Multiple transcript variants encoding different isoforms have been found for this
gene. (provided by RefSeq, Nov 2011)

UniProtKB/Swiss-Prot: VINEX_HUMAN, O60504
Function: Vinexin alpha isoform promotes up-regulation of actin stress fiber formation. Vinexin beta isoform plays a
role in cell spreading and enhances the activation of JNK/SAPK in response to EGF stimulation by using its third SH3
domain

Gene Wiki entry for SORBS3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000008.10  NC_018919.1  NT_167187.1  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SORBS3 gene promoter:
         E2F-4   E2F-3a   E2F-5   E2F-1   E2F   E2F-2   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidSORBS3 promoter sequence
   Search SABiosciences Chromatin IP Primers for SORBS3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SORBS3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 8p21.3   Ensembl cytogenetic band:  8p21.3   HGNC cytogenetic band: 8p21.3

SORBS3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SORBS3 gene location

GeneLoc information about chromosome 8         GeneLoc Exon Structure

GeneLoc location for GC08P022409:  view genomic region     (about GC identifiers)

Start:
22,402,499 bp from pter      End:
22,433,301 bp from pter
Size:
30,803 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: VINEX_HUMAN, O60504 (See protein sequence)
Recommended Name: Vinexin  
Size: 671 amino acids; 75341 Da
Subunit: Interacts with DLG5 through its third SH3 domain (By similarity). Interacts with vinculin by the first two SH3
domains and the proline rich region of vinculin. Binds to SOS (guanine nucleotide exchange factor of RAS and RAC),
through its third SH3 domain. The formation of this complex is down-regulated by phosphorylation of SOS. Interacts
with INPPL1/SHIP2, SAFB2, SOCS7 and SRCIN1. Interacts with FASLG. Interacts with MAPK1/ERK2 (By similarity)
Subcellular location: Isoform Alpha: Cell junction (By similarity). Cytoplasm, cytoskeleton (By similarity).
Note=Localized at cell-extracellular matrix junctions (By similarity). Both isoforms were localized at focal adhesion
and cell-cell adhesion sites
Subcellular location: Isoform Beta: Cell junction (By similarity). Nucleus. Cytoplasm, cytoskeleton (By similarity).
Note=Localized at cell-extracellular matrix junctions (By similarity). Both isoforms were localized at focal adhesion
and cell-cell adhesion sites, vinexin beta was also found in the nucleus
4 PDB 3D structures from and Proteopedia for SORBS3:
2CT3 (3D)        2DLM (3D)        2NWM (3D)        2YUP (3D)    
Secondary accessions: Q5BJE4 Q6NX54 Q96FY4 Q9UQE4
Alternative splicing: 2 isoforms:  O60504-1   O60504-2   

Explore the universe of human proteins at neXtProt for SORBS3: NX_O60504

Post-translational modifications:

  • Phosphorylated at Ser-530 by MAPK1/ERK2 during cell spreading (By similarity)1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O60504

  • SORBS3 Protein expression data from MOPED and PaxDb:    About this image 
    SORBS3 Protein Expression
    REFSEQ proteins (2 alternative transcripts): 
    NP_001018003.1  NP_005766.3  

    ENSEMBL proteins: 
     ENSP00000240123   ENSP00000429723   ENSP00000429685   ENSP00000428102   ENSP00000428051  
     ENSP00000431128   ENSP00000429887   ENSP00000429764   ENSP00000429058   ENSP00000429479  
     ENSP00000428678   ENSP00000428327   ENSP00000429747   ENSP00000428930   ENSP00000408476  
    Reactome Protein details: O60504
    Human Recombinant Protein Products for SORBS3: 
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    OriGene Protein Over-expression Lysate (see all 3): SORBS3
    OriGene Custom Protein Services for SORBS3 
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    Novus Biologicals SORBS3 Protein
    Novus Biologicals SORBS3 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SORBS3

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IEA--
    GO:0005737cytoplasm ----
    GO:0005829cytosol TAS--
    GO:0005856cytoskeleton IEA--
    GO:0005925colocalizes with focal adhesion IDA9885244

    SORBS3 for ontologies           About GeneDecksing



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    Uscn ELISAs and CLIAs for SORBS3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SORBS3 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR011511 SH3_2
     IPR000108 p67phox
     IPR001452 SH3_domain
     IPR003127 Sorb

    Graphical View of Domain Structure for InterPro Entry O60504

    ProtoNet protein and cluster: O60504

    1 Blocks protein family: IPB003127 Sorbin-like

    UniProtKB/Swiss-Prot: VINEX_HUMAN, O60504
    Similarity: Contains 3 SH3 domains
    Similarity: Contains 1 SoHo domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: VINEX_HUMAN, O60504
    Function: Vinexin alpha isoform promotes up-regulation of actin stress fiber formation. Vinexin beta isoform plays a
    role in cell spreading and enhances the activation of JNK/SAPK in response to EGF stimulation by using its third SH3
    domain

         Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005200structural constituent of cytoskeleton TAS9885244
    GO:0005515protein binding IPI18662323
    GO:0008134transcription factor binding IEA--
    GO:0017166vinculin binding IPI9885244
         
    SORBS3 for ontologies           About GeneDecksing


    Phenotypes:
         3 GenomeRNAi human phenotypes for SORBS3:
     Decreased cilium length  Decreased cilium length after   Decreased nuclei size in G2M 

         3 MGI mutant phenotypes (inferred from 2 alleles(MGI details for Sorbs3):
     cellular  homeostasis/metabolism  reproductive system 

    SORBS3 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for SORBS3: Sorbs3tm1Kmor Sorbs3tm1Kiok
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SORBS3 

    miRNA
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    8/12 QIAGEN miScript miRNA Assays for microRNAs that regulate SORBS3 (see all 12):
    hsa-miR-1236 hsa-miR-133b hsa-miR-520a-5p hsa-miR-3125 hsa-miR-3916 hsa-miR-455-3p hsa-miR-9 hsa-miR-133a
    SwitchGear 3'UTR luciferase reporter plasmidSORBS3 3' UTR sequence
    Inhib. RNA
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    Gene Editing
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    Clone
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SORBS3


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Striated Muscle Contraction
    Muscle contraction0.65
    Smooth Muscle Contraction0.11

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    2        Reactome Pathways for SORBS3
        Smooth Muscle Contraction
    Muscle contraction



    SORBS3 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for SORBS3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/63 Interacting proteins for SORBS3 (O605041, 2, 3 ENSP000002401234) via UniProtKB, MINT, STRING, and/or I2D (see all 63)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ABL1P005192, 3, ENSP000003614234MINT-2833733 MINT-2833716 MINT-2833332 MINT-2833234 MINT-2833514 MINT-2833758 I2D: score=1 STRING: ENSP00000361423
    SOCS7O145122, 3, ENSP000003306594MINT-56622 MINT-56620 MINT-56615 I2D: score=2 STRING: ENSP00000330659
    RTKNQ9BST92, 3, ENSP000002724304MINT-7215715 MINT-7215651 MINT-7215594 MINT-7215608 MINT-7215695 MINT-7215670 I2D: score=1 STRING: ENSP00000272430
    INPPL1O153572, 3, ENSP000002982294MINT-8078944 MINT-8078922 MINT-8078984 I2D: score=3 STRING: ENSP00000298229
    WASF2Q9Y6W52, ENSP000003962114MINT-7147173 MINT-7146815 MINT-7146792 STRING: ENSP00000396211
    About this table

    Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000122negative regulation of transcription from RNA polymerase II promoter IEA--
    GO:0006936muscle contraction TAS--
    GO:0007155cell adhesion TAS9885244
    GO:0031589cell-substrate adhesion IEA--
    GO:0043410positive regulation of MAPK cascade IEA--

    SORBS3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SORBS3

    3 HMDB Compounds for SORBS3    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine diphosphate5'-GDP (see all 10)146-91-8--
    Guanosine monophosphate5'-GMP (see all 14)85-32-5--
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    Search CenterWatch for drugs/clinical trials and news about SORBS3 / VINEX 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SORBS3 gene (2 alternative transcripts): 
    NM_001018003.2  NM_005775.4  

    Unigene Cluster for SORBS3:

    Sorbin and SH3 domain containing 3
    Hs.528572  [show with all ESTs]
    Unigene Representative Sequence: BC091514
    18/24 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 24):
    ENST00000522037 ENST00000523941 ENST00000240123(uc011kzk.1 uc003xbv.3)
    ENST00000517500 ENST00000517535 ENST00000523402 ENST00000520563 ENST00000524057
    ENST00000518512 ENST00000520574 ENST00000521787 ENST00000523740 ENST00000522315
    ENST00000519453 ENST00000523900 ENST00000518912 ENST00000523965 ENST00000521554


    miRNA
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    8/12 QIAGEN miScript miRNA Assays for microRNAs that regulate SORBS3 (see all 12):
    hsa-miR-1236 hsa-miR-133b hsa-miR-520a-5p hsa-miR-3125 hsa-miR-3916 hsa-miR-455-3p hsa-miR-9 hsa-miR-133a
    SwitchGear 3'UTR luciferase reporter plasmidSORBS3 3' UTR sequence
    Inhib. RNA
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    Sirion Biotech Custom design and validation of potent shRNA sequences against SORBS3 
    Clone
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    Additional cDNA sequence: 

    AF037261.1 AF064807.1 AK303950.1 BC004314.1 BC010146.2 BC067260.1 BC091514.1 

    24/29 DOTS entries (see all 29):

    DT.92433783  DT.100038429  DT.100828958  DT.120628482  DT.91926199  DT.92433786  DT.100729185  DT.120628411 
    DT.120628518  DT.75103734  DT.100828971  DT.100828978  DT.120628451  DT.120628525  DT.92433787  DT.95140503 
    DT.100772845  DT.100828959  DT.100828964  DT.100828965  DT.100828973  DT.120628449  DT.40202046  DT.92433776 

    24/306 AceView cDNA sequences (see all 306):

    BI820254 BE550698 BM762330 CR622445 BQ005326 BG419471 BM695393 BQ941725 
    CR605936 BF515469 BG763775 CR621670 AL041129 BU071310 BF221857 CR606865 
    BF447251 BM665038 BU543651 BM724959 BQ641600 AA294821 BF438188 BE707490 

    GeneLoc Exon Structure

    5/24 Alternative Splicing Database (ASD) splice patterns (SP) for SORBS3 (see all 24)    About this scheme

    ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c ^ 5 ^ 6 ^ 7a · 7b · 7c ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13a · 13b ^ 14a · 14b · 14c ^ 15a · 15b ·
    SP1:                          -                       -           -     -                                   -     -     -     -                 -     -     -   
    SP2:                                                                                                                                                            
    SP3:                                                                    -                                   -     -     -     -                 -     -     -   
    SP4:                                                                                                                                            -     -     -   
    SP5:                                                                                                                                                            

    ExUns: 15c · 15d · 15e · 15f ^ 16a · 16b · 16c ^ 17a · 17b · 17c ^ 18 ^ 19a · 19b ^ 20a · 20b · 20c ^ 21a · 21b · 21c ^ 22a · 22b · 22c · 22d · 22e · 22f · 22g ^
    SP1:  -     -     -           -     -     -     -                                                                                                               
    SP2:                          -     -     -     -                                                                                                               
    SP3:  -     -     -                                                                                                                                             
    SP4:  -     -     -           -     -     -     -                       -     -                                                                                 
    SP5:                          -     -     -     -     -     -                                                                                                   

    ExUns: 23a · 23b ^ 24 ^ 25a · 25b · 25c ^ 26a · 26b
    SP1:  -                                             
    SP2:  -                                             
    SP3:                                                
    SP4:                                                
    SP5:  -                                             


    ECgene alternative splicing isoforms for SORBS3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SORBS3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCAACTTGGA
    SORBS3 Expression
    About this image
    See SORBS3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SORBS3

    SOURCE GeneReport for Unigene cluster: Hs.528572

    UniProtKB/Swiss-Prot: VINEX_HUMAN, O60504
    Tissue specificity: Both isoforms are expressed in different tissues like heart, placenta, brain, skeletal muscle and
    pancreas. Isoform beta is especially found in liver

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for SORBS3 gene from 4/14 species (see all 14)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    lizard
    (Anolis carolinensis)
    Reptilia SORBS36
    --
    68(a)
    1 ↔ 1
    GL343443.1(394065-411678)
    zebrafish
    (Danio rerio)
    Actinopterygii sorbs31 sorbin and SH3 domain containing 3 52.09(n)
    48.58(a)
      541478  NM_001014290.1  NP_001014312.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CAP6
    CAP
    5(a)
    1 → many
    2R(6156528-6194529)
    worm
    (Caenorhabditis elegans)
    Secernentea sorb-16
    Temporarily Assigned Gene name family member (tag-...
    12(a)
    1 → many
    IV(13750312-13770583)


    ENSEMBL Gene Tree for SORBS3 (if available)
    TreeFam Gene Tree for SORBS3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SORBS3 gene
    SH3RF32  SH3RF22  SH3RF12  SORBS12  SORBS22  SH3D192  
    18/19 SIMAP similar genes for SORBS3 using alignment to 15 protein entries:     VINEX_HUMAN (see all proteins) (see all similar genes):
    ARHGAP4    GRB2    VAV3    VAV1    SH3GL2    DOCK2
    SH3RF3    ARHGEF7    SORBS1    SORBS2    ITSN1    NOSTRIN
    GRAP2    ITSN2    DKFZp686N08224    STAM    ABI1    SH3GL1

    SORBS3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/524 NCBI SNPs in SORBS3 are shown (see all 524    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 8 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs595254551,2
    F--20949807(+) GCGTGG/CATAAG 1 -- us2k11Minor allele frequency- C:0.03WA 118
    rs774716961,2
    C--20949875(+) CCCAGG/AGTTCC 1 -- us2k12Minor allele frequency- A:0.07CSA WA 120
    rs745366951,2
    F--20950037(+) AACTGG/TCAGAC 1 -- us2k11Minor allele frequency- T:0.03WA 118
    rs800942251,2
    F--20950727(+) AGCGAG/CAACAG 1 -- us2k11Minor allele frequency- C:0.03WA 118
    rs769659061,2
    C--20950734(+) ACAGCG/AGAAAA 1 -- us2k12Minor allele frequency- A:0.07NA 122
    rs744444641,2
    F--20950777(+) AACACC/GAAGAC 1 -- us2k11Minor allele frequency- G:0.05NA 120
    rs762421351,2
    F--20951058(+) TCCCGG/TCCTGT 1 -- us2k11Minor allele frequency- T:0.04EA 120
    rs7542711,2
    C,A--20951990(-) GCGGGA/GGAGGG 1 -- int1 trp36Minor allele frequency- G:0.08MN NA WA 428
    rs736727571,2
    C--20952161(+) AGAAGG/AACTCG 1 -- int11Minor allele frequency- A:0.50WA 2
    rs778728381,2
    --20952833(+) CACCTC/TCCACC 1 -- int11Minor allele frequency- T:0.01WA 118

    HapMap Linkage Disequilibrium report for SORBS3 (22402499 - 22433301 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for SORBS3
         2 CNVs: 2746 3726

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SORBS3 for disorders           About GeneDecksing

    OMIM gene information: 610795    OMIM disorders: --

    2 diseases for SORBS3:    About MalaCards
    hepatocellular carcinoma    carcinoma


    Export disorders for SORBS3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SORBS3 gene, integrated from 9 sources (see all 51):
    (articles sorted by number of sources associating them with SORBS3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Vinexin: a novel vinculin-binding protein with multiple SH3 domains enhances actin cytoskeletal organization. (PubMed id 9885244)1, 2, 3 Kioka N.... Aota S. (1999)
    2. Vinexin forms a signaling complex with Sos and modulates epidermal growth factor-induced c-Jun N-terminal kinase/stress-activated protein kinase activities. (PubMed id 10585480)1, 2, 9 Akamatsu M.... Kioka N. (1999)
    3. The suppressor of cytokine signaling (SOCS)-7 interacts with the actin cytoskeleton through vinexin. (PubMed id 15242778)1, 2, 9 Martens N.... Hooghe-Peters E.L. (2004)
    4. SAFB2, a new scaffold attachment factor homolog and estrogen receptor corepressor. (PubMed id 12660241)1, 2, 9 Townson S.M.... Oesterreich S. (2003)
    5. Identification of SH3 domain interaction partners of human FasL (CD178) by phage display screening. (PubMed id 19807924)1, 2 Voss M....Janssen O. (2009)
    6. Characterization of a multidomain adaptor protein, p1 40Cap, as part of a pre-synaptic complex. (PubMed id 18662323)1, 2 Ito H....Nagata K. (2008)
    7. A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243)1, 2 Beausoleil S.A.... Gygi S.P. (2006)
    8. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    9. SHIP2 interaction with the cytoskeletal protein Vinexin. (PubMed id 16302969)1, 2 Paternotte N.... Erneux C. (2005)
    10. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10174 HGNC: 30907 AceView: SCAM-1 Ensembl:ENSG00000120896 euGenes: HUgn10174
    ECgene: SORBS3 H-InvDB: SORBS3

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SORBS3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SORBS3 gene:
    Search GeneIP for patents involving SORBS3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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