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Aliases for SOCS5P2 Gene

Aliases for SOCS5P2 Gene

  • Suppressor Of Cytokine Signaling 5 Pseudogene 2 2 3 5

External Ids for SOCS5P2 Gene

Previous GeneCards Identifiers for SOCS5P2 Gene

  • GC09P138342

Summaries for SOCS5P2 Gene

GeneCards Summary for SOCS5P2 Gene

SOCS5P2 (Suppressor Of Cytokine Signaling 5 Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOCS5P2 Gene

Genomics for SOCS5P2 Gene

Regulatory Elements for SOCS5P2 Gene

Enhancers for SOCS5P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F135468 1.3 Ensembl ENCODE 0.3 +21.5 21530 1.6 PKNOX1 ATF1 ARNT GLIS2 GATA2 KLF7 FOS SP3 NCOA1 TSHZ1 GC09M135456 SOCS5P2
GH09F135462 1.1 Ensembl ENCODE 0.3 +16.6 16636 2.9 TBP RAD21 RFX5 SMARCC2 RCOR1 FOS DEK SMARCC1 CEBPB JUNB GC09M135456 SOCS5P2
GH09F135456 0.5 FANTOM5 0.4 +9.4 9382 0.1 CTCF ZBTB33 SOCS5P2 GC09M135456
GH09F135472 0.6 ENCODE 0.3 +24.8 24804 0.2 RFX1 GATA2 NR2F1 HMBOX1 CEBPB NR2F6 GC09M135456 SOCS5P2
GH09F135471 0.6 ENCODE 0.3 +24.4 24380 0.6 JUND RFX1 GATA2 NR2F1 HMBOX1 CEBPB GC09M135456 SOCS5P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SOCS5P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for SOCS5P2 Gene

Chromosome:
9
Start:
135,447,446 bp from pter
End:
135,450,154 bp from pter
Size:
2,709 bases
Orientation:
Plus strand

Genomic View for SOCS5P2 Gene

Genes around SOCS5P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOCS5P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOCS5P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOCS5P2 Gene

Proteins for SOCS5P2 Gene

Post-translational modifications for SOCS5P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOCS5P2 Gene

Domains & Families for SOCS5P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SOCS5P2 Gene

Function for SOCS5P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOCS5P2 Gene

Localization for SOCS5P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOCS5P2 Gene

Pathways & Interactions for SOCS5P2 Gene

SuperPathways for SOCS5P2 Gene

No Data Available

Interacting Proteins for SOCS5P2 Gene

Gene Ontology (GO) - Biological Process for SOCS5P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SOCS5P2 Gene

Transcripts for SOCS5P2 Gene

mRNA/cDNA for SOCS5P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SOCS5P2 Gene

No ASD Table

Relevant External Links for SOCS5P2 Gene

GeneLoc Exon Structure for
SOCS5P2
ECgene alternative splicing isoforms for
SOCS5P2

Expression for SOCS5P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SOCS5P2 Gene

mRNA differential expression in normal tissues according to GTEx for SOCS5P2 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x4.3).

NURSA nuclear receptor signaling pathways regulating expression of SOCS5P2 Gene:

SOCS5P2
genes like me logo Genes that share expression patterns with SOCS5P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SOCS5P2 Gene

Orthologs for SOCS5P2 Gene

Evolution for SOCS5P2 Gene

ENSEMBL:
Gene Tree for SOCS5P2 (if available)
TreeFam:
Gene Tree for SOCS5P2 (if available)

No data available for Orthologs for SOCS5P2 Gene

Paralogs for SOCS5P2 Gene

No data available for Paralogs for SOCS5P2 Gene

Variants for SOCS5P2 Gene

Relevant External Links for SOCS5P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SOCS5P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SOCS5P2 Gene

Disorders for SOCS5P2 Gene

No disorders were found for SOCS5P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SOCS5P2 Gene

Publications for SOCS5P2 Gene

No publications were found for SOCS5P2 Gene.

Products for SOCS5P2 Gene

Sources for SOCS5P2 Gene

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