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Aliases for SOCS2-AS1 Gene

Subcategory (RNA class) for SOCS2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SOCS2-AS1 Gene

  • SOCS2 Antisense RNA 1 2 3 5
  • SOCS2 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SOCS2-AS1 Gene

Previous GeneCards Identifiers for SOCS2-AS1 Gene

  • GC12M093938

Summaries for SOCS2-AS1 Gene

GeneCards Summary for SOCS2-AS1 Gene

SOCS2-AS1 (SOCS2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SOCS2-AS1 Gene

Genomics for SOCS2-AS1 Gene

Regulatory Elements for SOCS2-AS1 Gene

Enhancers for SOCS2-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around SOCS2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for SOCS2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around SOCS2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SOCS2-AS1 Gene

93,542,463 bp from pter
93,571,768 bp from pter
29,306 bases
Minus strand

Genomic View for SOCS2-AS1 Gene

Genes around SOCS2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SOCS2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SOCS2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SOCS2-AS1 Gene

Proteins for SOCS2-AS1 Gene

Post-translational modifications for SOCS2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SOCS2-AS1 Gene

Domains & Families for SOCS2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SOCS2-AS1 Gene

Function for SOCS2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SOCS2-AS1 Gene

Localization for SOCS2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SOCS2-AS1 Gene

Pathways & Interactions for SOCS2-AS1 Gene

SuperPathways for SOCS2-AS1 Gene

No Data Available

Interacting Proteins for SOCS2-AS1 Gene

Gene Ontology (GO) - Biological Process for SOCS2-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SOCS2-AS1 Gene

Drugs & Compounds for SOCS2-AS1 Gene

No Compound Related Data Available

Transcripts for SOCS2-AS1 Gene

mRNA/cDNA for SOCS2-AS1 Gene

(5) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SOCS2-AS1 Gene

SOCS2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SOCS2-AS1 Gene

No ASD Table

Relevant External Links for SOCS2-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SOCS2-AS1 Gene

mRNA expression in normal human tissues for SOCS2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for SOCS2-AS1 Gene

This gene is overexpressed in Prostate (x6.7), Cervix - Ectocervix (x4.4), and Uterus (x4.1).

SOURCE GeneReport for Unigene cluster for SOCS2-AS1 Gene Hs.602278

genes like me logo Genes that share expression patterns with SOCS2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SOCS2-AS1 Gene

Orthologs for SOCS2-AS1 Gene

Evolution for SOCS2-AS1 Gene

Gene Tree for SOCS2-AS1 (if available)
Gene Tree for SOCS2-AS1 (if available)

No data available for Orthologs for SOCS2-AS1 Gene

Paralogs for SOCS2-AS1 Gene

No data available for Paralogs for SOCS2-AS1 Gene

Variants for SOCS2-AS1 Gene

Sequence variations from dbSNP and Humsavar for SOCS2-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs10859532 -- 93,567,141(+) GTGGT(C/G)GTACG nc-transcript-variant
rs35760273 -- 93,565,764(+) AGAAG(-/A)ATGAA intron-variant
rs192499051 -- 93,567,525(+) ATATG(G/T)TCTGA intron-variant
rs41371345 -- 93,567,663(+) GACCA(C/T)TGAAT intron-variant
rs112467440 -- 93,566,706(+) GAGAA(A/T)GCCCA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for SOCS2-AS1 Gene

Disorders for SOCS2-AS1 Gene

Relevant External Links for SOCS2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SOCS2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SOCS2-AS1 Gene

Publications for SOCS2-AS1 Gene

  1. Transcriptome interrogation of human myometrium identifies differentially expressed sense-antisense pairs of protein-coding and long non-coding RNA genes in spontaneous labor at term. (PMID: 24168098) Romero R. … Lipovich L. (J. Matern. Fetal. Neonatal. Med. 2014) 2 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for SOCS2-AS1 Gene

Sources for SOCS2-AS1 Gene