Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNX29P1 Gene

Aliases for SNX29P1 Gene

  • Sorting Nexin 29 Pseudogene 1 2 3
  • RUN Domain Containing 2B 2 3
  • Putative RUN Domain-Containing Protein 2B 3
  • Sorting Nexin 29 Protein Pseudogene 1 3
  • RUNDC2-Like Protein 3
  • RUNDC2L 3
  • RUNDC2B 3

External Ids for SNX29P1 Gene

Previous HGNC Symbols for SNX29P1 Gene

  • RUNDC2B

Previous GeneCards Identifiers for SNX29P1 Gene

  • GC16P021358

Summaries for SNX29P1 Gene

GeneCards Summary for SNX29P1 Gene

SNX29P1 (Sorting Nexin 29 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNX29P1 Gene

Genomics for SNX29P1 Gene

Genomic Location for SNX29P1 Gene

Start:
21,349,363 bp from pter
End:
21,386,064 bp from pter
Size:
36,702 bases
Orientation:
Plus strand

Genomic View for SNX29P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNX29P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX29P1 Gene

No data available for Regulatory Elements for SNX29P1 Gene

Proteins for SNX29P1 Gene

Post-translational modifications for SNX29P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX29P1 Gene

Domains for SNX29P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNX29P1 Gene

Function for SNX29P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNX29P1 Gene

Localization for SNX29P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNX29P1 Gene

Pathways for SNX29P1 Gene

SuperPathways for SNX29P1 Gene

No Data Available

Interacting Proteins for SNX29P1 Gene

Gene Ontology (GO) - Biological Process for SNX29P1 Gene

None

No data available for Pathways by source for SNX29P1 Gene

Transcripts for SNX29P1 Gene

mRNA/cDNA for SNX29P1 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNX29P1 Gene

Sorting nexin 29 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNX29P1 Gene

No ASD Table

Relevant External Links for SNX29P1 Gene

GeneLoc Exon Structure for
SNX29P1
ECgene alternative splicing isoforms for
SNX29P1

Expression for SNX29P1 Gene

mRNA expression in normal human tissues for SNX29P1 Gene

SOURCE GeneReport for Unigene cluster for SNX29P1 Gene Hs.443656

genes like me logo Genes that share expressions with SNX29P1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNX29P1 Gene

Orthologs for SNX29P1 Gene

Evolution for SNX29P1 Gene

ENSEMBL:
Gene Tree for SNX29P1 (if available)
TreeFam:
Gene Tree for SNX29P1 (if available)

No data available for Orthologs for SNX29P1 Gene

Paralogs for SNX29P1 Gene

No data available for Paralogs for SNX29P1 Gene

Variants for SNX29P1 Gene

Sequence variations from dbSNP and Humsavar for SNX29P1 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs155935 -- 21,350,111(-) AAGAC(A/C)GTCCT intron-variant
rs161332 -- 21,351,852(-) CAAAA(C/G)AAAAT intron-variant
rs161333 -- 21,357,006(+) aggag(A/G)cccag intron-variant
rs187932 -- 21,376,214(-) acgga(C/T)ggaaa intron-variant
rs266789 -- 21,385,701(+) CGACC(A/G)CTCCT nc-transcript-variant

Relevant External Links for SNX29P1 Gene

HapMap Linkage Disequilibrium report
SNX29P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for SNX29P1 Gene

Disorders for SNX29P1 Gene

No disorders were found for SNX29P1 Gene.

No data available for UniProtKB/Swiss-Prot for SNX29P1 Gene

Publications for SNX29P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3
  3. The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J. … Pennacchio L.A. (Nature 2004) 3
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PMID: 19690332) Mayya V. … Han D.K. (Sci. Signal. 2009) 3

Products for SNX29P1 Gene

Sources for SNX29P1 Gene

Back to Top

Content