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Aliases for SNX25P1 Gene

Aliases for SNX25P1 Gene

  • Sorting Nexin 25 Pseudogene 1 2 3 5

External Ids for SNX25P1 Gene

Previous GeneCards Identifiers for SNX25P1 Gene

  • GC01P211592

Summaries for SNX25P1 Gene

GeneCards Summary for SNX25P1 Gene

SNX25P1 (Sorting Nexin 25 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNX25P1 Gene

Genomics for SNX25P1 Gene

Regulatory Elements for SNX25P1 Gene

Enhancers for SNX25P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G211674 1.2 ENCODE 10.1 +258.6 258578 2.3 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC MEF2D DTL INTS7 SNX25P1 SLC30A1 LOC91548 NEK2 FDPSP8
GH01G212311 1 dbSUPER 9.7 +896.3 896275 2.8 ATF1 FOXA2 PKNOX1 SIN3A GLIS2 FOS DEK TSHZ1 TBX21 ZNF592 TMEM206 PPP2R5A ANGEL2 DTL INTS7 SNX25P1 RPL23AP18 ENSG00000234915
GH01G210617 0.6 dbSUPER 4.4 -797.8 -797788 3.5 BHLHE40 JUN ZFP37 FOSL1 ZSCAN21 JUND ATF3 SMARCA4 POLR2A FOS SNX25P1 ENSG00000279333 LOC100421537
GH01G211416 1.2 FANTOM5 ENCODE 0.7 -0.1 -112 1.5 HDAC1 ELF3 SIN3A DMAP1 USF2 CEBPB ELF1 GATAD2B TBX21 ZNF589 LINC00467 SNX25P1
GH01G211420 0.6 FANTOM5 0.7 +3.3 3304 0.1 FOSL1 L3MBTL2 PATZ1 ZNF398 ZBTB20 ZNF18 TRAF5 GC01M211424 SNX25P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNX25P1 on UCSC Golden Path with GeneCards custom track

Promoters for SNX25P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000019553 -424 1200 HDAC1 ELF3 PKNOX1 SIN3A DMAP1 USF2 CEBPB ELF1 GATAD2B TBX21

Genomic Location for SNX25P1 Gene

Chromosome:
1
Start:
211,417,025 bp from pter
End:
211,417,937 bp from pter
Size:
913 bases
Orientation:
Plus strand

Genomic View for SNX25P1 Gene

Genes around SNX25P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNX25P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNX25P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX25P1 Gene

Proteins for SNX25P1 Gene

Post-translational modifications for SNX25P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX25P1 Gene

Domains & Families for SNX25P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNX25P1 Gene

Function for SNX25P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX25P1 Gene

Localization for SNX25P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNX25P1 Gene

Pathways & Interactions for SNX25P1 Gene

SuperPathways for SNX25P1 Gene

No Data Available

Interacting Proteins for SNX25P1 Gene

Gene Ontology (GO) - Biological Process for SNX25P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNX25P1 Gene

Transcripts for SNX25P1 Gene

mRNA/cDNA for SNX25P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNX25P1 Gene

No ASD Table

Relevant External Links for SNX25P1 Gene

GeneLoc Exon Structure for
SNX25P1
ECgene alternative splicing isoforms for
SNX25P1

Expression for SNX25P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNX25P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNX25P1 Gene:

SNX25P1
genes like me logo Genes that share expression patterns with SNX25P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX25P1 Gene

Orthologs for SNX25P1 Gene

Evolution for SNX25P1 Gene

ENSEMBL:
Gene Tree for SNX25P1 (if available)
TreeFam:
Gene Tree for SNX25P1 (if available)

No data available for Orthologs for SNX25P1 Gene

Paralogs for SNX25P1 Gene

No data available for Paralogs for SNX25P1 Gene

Variants for SNX25P1 Gene

Relevant External Links for SNX25P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNX25P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNX25P1 Gene

Disorders for SNX25P1 Gene

No disorders were found for SNX25P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNX25P1 Gene

Publications for SNX25P1 Gene

No publications were found for SNX25P1 Gene.

Products for SNX25P1 Gene

Sources for SNX25P1 Gene

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