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Aliases for SNX25P1 Gene

Aliases for SNX25P1 Gene

  • Sorting Nexin 25 Pseudogene 1 2 3 5

External Ids for SNX25P1 Gene

Previous GeneCards Identifiers for SNX25P1 Gene

  • GC01P211592

Summaries for SNX25P1 Gene

GeneCards Summary for SNX25P1 Gene

SNX25P1 (Sorting Nexin 25 Pseudogene 1) is a Pseudogene.

Additional gene information for SNX25P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNX25P1 Gene

Genomics for SNX25P1 Gene

GeneHancer (GH) Regulatory Elements for SNX25P1 Gene

Promoters and enhancers for SNX25P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I211416 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE 550.8 -0.2 -202 1.6 CTCF ZNF146 PKNOX1 ZNF449 MAX SIN3A DMAP1 KMT2B ZNF213 EZH2 SNX25P1 LINC00467
GH01I211674 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 +258.6 258578 2.3 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC LOC91548 NEK2 RCOR3 SNX25P1 RPL21P28 DTL INTS7 SLC30A1 FDPSP8
GH01I211927 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.8 +512.4 512432 3.7 HDGF SMAD1 FOXA2 ARNT ARID4B NEUROD1 FEZF1 DMAP1 YY1 ZNF766 LOC102723727 RCOR3 LPGAT1 LOC91548 NEK2 SNX25P1 ENSG00000212187 RPL21P28 INTS7 ENSG00000233626
GH01I210617 Enhancer 0.3 dbSUPER 4.4 -797.8 -797787 3.5 POLR2A SNX25P1 ENSG00000279333 LOC100421537 HHAT
GH01I211381 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.3 -34.1 -34121 2.4 HDGF PKNOX1 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B LINC00467 TRAF5 SNX25P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNX25P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNX25P1 Gene

Genomic Locations for SNX25P1 Gene
chr1:211,417,025-211,417,937
(GRCh38/hg38)
Size:
913 bases
Orientation:
Plus strand
chr1:211,590,367-211,591,279
(GRCh37/hg19)

Genomic View for SNX25P1 Gene

Genes around SNX25P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNX25P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNX25P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNX25P1 Gene

Proteins for SNX25P1 Gene

Post-translational modifications for SNX25P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNX25P1 Gene

Domains & Families for SNX25P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNX25P1 Gene

Function for SNX25P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNX25P1 Gene

Localization for SNX25P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNX25P1 Gene

Pathways & Interactions for SNX25P1 Gene

SuperPathways for SNX25P1 Gene

No Data Available

Interacting Proteins for SNX25P1 Gene

Gene Ontology (GO) - Biological Process for SNX25P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNX25P1 Gene

Drugs & Compounds for SNX25P1 Gene

No Compound Related Data Available

Transcripts for SNX25P1 Gene

mRNA/cDNA for SNX25P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNX25P1 Gene

No ASD Table

Relevant External Links for SNX25P1 Gene

GeneLoc Exon Structure for
SNX25P1
ECgene alternative splicing isoforms for
SNX25P1

Expression for SNX25P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNX25P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNX25P1 Gene:

SNX25P1
genes like me logo Genes that share expression patterns with SNX25P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNX25P1 Gene

Orthologs for SNX25P1 Gene

Evolution for SNX25P1 Gene

ENSEMBL:
Gene Tree for SNX25P1 (if available)
TreeFam:
Gene Tree for SNX25P1 (if available)

No data available for Orthologs for SNX25P1 Gene

Paralogs for SNX25P1 Gene

No data available for Paralogs for SNX25P1 Gene

Variants for SNX25P1 Gene

Additional Variant Information for SNX25P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNX25P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNX25P1 Gene

Disorders for SNX25P1 Gene

No disorders were found for SNX25P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNX25P1 Gene

Publications for SNX25P1 Gene

No publications were found for SNX25P1 Gene.

Products for SNX25P1 Gene

Sources for SNX25P1 Gene

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