Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

SNX10 Gene

protein-coding   GIFtS: 48
GCID: GC07P026331

sorting nexin 10

  Search for SNX10
in our new
 Human Malady Compendium 
Biological research products
for SNX10
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Sorting Nexin 101 2
OPTB82
Sorting Nexin-102

External Ids:    HGNC: 149741   Entrez Gene: 298872   Ensembl: ENSG000000863007   OMIM: 6147805   UniProtKB: Q9Y5X03   

Export aliases for SNX10 gene to outside databases

Previous GC identifers: GC07P025975 GC07P026073 GC07P026104 GC07P026298 GC07P026213


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for SNX10:
This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a
phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled
coil region, like some family members. This gene may play a role in regulating endosome homeostasis. Alternative
splicing results in multiple transcript variants. (provided by RefSeq, Dec 2010)

UniProtKB/Swiss-Prot: SNX10_HUMAN, Q9Y5X0
Function: May be involved in several stages of intracellular trafficking (By similarity). May play a role in endosome
homeostasis. Overexpression causes formation of huge vacuoles




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000007.13  NC_018918.1  NT_007819.17  NT_079592.2  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the SNX10 gene promoter:
         TBP   AP-1   POU3F2   C/EBPalpha   GATA-1   GATA-2   CHOP-10   SRY   NF-kappaB2   TFIID   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): SNX10 promoter sequence
   Search SABiosciences Chromatin IP Primers for SNX10

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SNX10


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 7p15.2   Ensembl cytogenetic band:  7p15.2   HGNC cytogenetic band: 7p15.2

SNX10 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
SNX10 gene location

GeneLoc information about chromosome 7         GeneLoc Exon Structure

GeneLoc location for GC07P026331:  view genomic region     (about GC identifiers)

Start:
26,331,515 bp from pter      End:
26,413,949 bp from pter
Size:
82,435 bases      Orientation:
plus strand

1 alternative location:
Chr7+,CRA_TCAG 26,382,693-26,465,116     

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: SNX10_HUMAN, Q9Y5X0 (See protein sequence)
Recommended Name: Sorting nexin-10  
Size: 201 amino acids; 23598 Da
Subcellular location: Cytoplasm. Endosome membrane; Peripheral membrane protein; Cytoplasmic side
Secondary accessions: E9PFH5 Q8IYT5
Alternative splicing: 2 isoforms:  Q9Y5X0-1   Q9Y5X0-2   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for SNX10: NX_Q9Y5X0

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y5X0

  • SNX10 Protein expression data from MOPED and PaxDb:    About this image 
    SNX10 Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_001186764.1  NP_001186766.1  NP_001186767.1  NP_037454.2  

    ENSEMBL proteins: 
     ENSP00000408164   ENSP00000343709   ENSP00000393690   ENSP00000379661   ENSP00000387274  
     ENSP00000386540   ENSP00000395474  

    Human Recombinant Protein Products for SNX10: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    OriGene Purified Protein: SNX10
    OriGene Protein Over-expression Lysate: SNX10
    OriGene Custom Protein Services for SNX10 
    GenScript Custom Purified and Recombinant Proteins Services for SNX10
    Novus Biologicals SNX10 Protein
    Novus Biologicals SNX10 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for SNX10

    Gene Ontology (GO): 1 cellular component term (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0031313extrinsic to endosome membrane IDA17012226

    SNX10 for ontologies           About GeneDecksing



    SNX10 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Browse OriGene Antibodies
    OriGene Custom Antibody Services for SNX10 
    GenScript Custom Superior Antibodies Services for SNX10
    Novus Biologicals SNX10 Antibodies
    Abcam antibodies for SNX10 
    Uscn Antibodies for SNX10
    Search ThermoFisher Antibodies for SNX10

    Assay Products for SNX10: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for SNX10
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for SNX10


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    SNX10 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001683 Phox

    Graphical View of Domain Structure for InterPro Entry Q9Y5X0

    ProtoNet protein and cluster: Q9Y5X0

    1 Blocks protein family: IPB001683 Phox-like

    UniProtKB/Swiss-Prot: SNX10_HUMAN, Q9Y5X0
    Domain: The PX domain mediates interaction with membranes enriched in phosphatidylinositol 3-phosphate
    Similarity: Belongs to the sorting nexin family
    Similarity: Contains 1 PX (phox homology) domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: SNX10_HUMAN, Q9Y5X0
    Function: May be involved in several stages of intracellular trafficking (By similarity). May play a role in endosome
    homeostasis. Overexpression causes formation of huge vacuoles

         Gene Ontology (GO): 2 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:00055451-phosphatidylinositol binding IMP17012226
    GO:0035091phosphatidylinositol binding ----
         
    SNX10 for ontologies           About GeneDecksing


    Phenotypes:
         2 GenomeRNAi human phenotypes for SNX10:
     Synthetic lethal with Ras  Synthetic lethal with imatinib 

    Animal Models:
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SNX10 

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: SNX10
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SNX10
    8/17 QIAGEN miScript miRNA Assays for microRNAs that regulate SNX10 (see all 17):
    hsa-miR-30c hsa-miR-513a-5p hsa-miR-30d hsa-miR-944 hsa-miR-570 hsa-miR-141* hsa-miR-30a hsa-miR-1323
    SwitchGear 3'UTR luciferase reporter plasmidSNX10 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SNX10 (see all 7)
    OriGene shRNA RFP: SNX10
    OriGene siRNA: SNX10
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SNX10
    Sirion Biotech Custom design and validation of potent shRNA sequences against SNX10 

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for SNX10
    Sirion Biotech Customized adenovirus for overexpression of SNX10 
    Sirion Biotech Customized adenovirus for potent knockdown of SNX10

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): SNX10 (NM_001199837)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SNX10
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SNX10 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for SNX10
    Search LifeMap BioReagents cell lines for SNX10
    Sirion Biotech Customized stable knockdown cell line services for SNX10 
    Sirion Biotech Customized inducible knockdown cell line services for SNX10
    Sirion Biotech Customized stable overexpressing cell line services for SNX10
    Sirion Biotech Customized inducible overexpressing cell line services for SNX10

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SNX10


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section



    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for SNX10

    STRING Interaction Network Preview (showing 2 interactants - click image to see more details)

    2 Interacting proteins for SNX10 (ENSP000003437094) via UniProtKB, MINT, STRING, and/or I2D
    InteractantInteraction Details
    GeneCardExternal ID(s)
    UBCENSP000003448184STRING: ENSP00000344818
    ELAVL1ENSP000003852694STRING: ENSP00000385269
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0007032endosome organization IMP17012226
    GO:0007154cell communication IEA--
    GO:0015031protein transport IEA--

    SNX10 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for SNX10
    Search CenterWatch for drugs/clinical trials and news about SNX10 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for SNX10 gene (4 alternative transcripts): 
    NM_001199835.1  NM_001199837.1  NM_001199838.1  NM_013322.2  

    Unigene Cluster for SNX10:

    Sorting nexin 10
    Hs.741316  [show with all ESTs]
    Unigene Representative Sequence: BX648363
    8 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000416246 ENST00000338523(uc011jzg.2 uc003sxx.3 uc010kuu.3)
    ENST00000412416 ENST00000396376(uc010kuv.3 uc010kuw.3) ENST00000409367
    ENST00000409838 ENST00000462993 ENST00000446848

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: SNX10
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat SNX10
    8/17 QIAGEN miScript miRNA Assays for microRNAs that regulate SNX10 (see all 17):
    hsa-miR-30c hsa-miR-513a-5p hsa-miR-30d hsa-miR-944 hsa-miR-570 hsa-miR-141* hsa-miR-30a hsa-miR-1323
    SwitchGear 3'UTR luciferase reporter plasmidSNX10 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SNX10 (see all 7)
    OriGene shRNA RFP: SNX10
    OriGene siRNA: SNX10
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SNX10
    Sirion Biotech Custom design and validation of potent shRNA sequences against SNX10 
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10 (see all 5)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector (see all 4): SNX10 (NM_001199837)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for SNX10
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SNX10 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SNX10
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SNX10
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SNX10
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SNX10

    Additional cDNA sequence: 

    AF121860.1 AK296142.1 AK307905.1 AK309162.1 AK311256.1 AK312850.1 AK316088.1 BC031050.1 
    BC034992.1 BX648363.1 NR_037670.1 

    10 DOTS entries:

    DT.449358  DT.100775158  DT.91919321  DT.121040657  DT.121040650  DT.100024126  DT.121040639  DT.121040707 
    DT.121040708  DT.92436536 

    24/160 AceView cDNA sequences (see all 160):

    F07443 T35142 AL519882 AA279300 BU630498 Z44623 AI633856 BC034992 
    AL533521 BF000784 Z41707 AA808370 NM_013322 BQ025395 CR612403 BQ787682 
    CB112375 AA258005 BU160208 AA441938 Z40665 AI962011 AV722112 CA447324 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    SNX10 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CCATCCAGGC
    SNX10 Expression
    About this image

    SNX10 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Line H9 (WA09) (Embryonic Stem Cell)Early Embryo, Inner Cell Mass
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See SNX10 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for SNX10

    SOURCE GeneReport for Unigene cluster: Hs.741316
        SABiosciences Custom PCR Arrays for SNX10
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SNX10
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat SNX10
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SNX10
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SNX10
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SNX10

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for SNX10 gene from 4/16 species (see all 16)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves SNX101 sorting nexin 10 75.67(n)
    76(a)
      420628  NM_001030986.1  NP_001026157.1 
    lizard
    (Anolis carolinensis)
    Reptilia SNX106
    --
    74(a)
    1 ↔ 1
    6(31922165-31936695)
    African clawed frog
    (Xenopus laevis)
    Amphibia BI448334.12   -- 73.52(n)    BI448334.1 
    zebrafish
    (Danio rerio)
    Actinopterygii BC055622.12   -- 74.24(n)    BC055622.1 


    ENSEMBL Gene Tree for SNX10 (if available)
    TreeFam Gene Tree for SNX10 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for SNX10 gene
    SNX32  SNX112  SNX122  
    4 SIMAP similar genes for SNX10 using alignment to 8 protein entries:     SNX10_HUMAN (see all proteins):
    SNX11    SNX3    SNX12    SNX30

    SNX10 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1478 NCBI SNPs in SNX10 are shown (see all 1478    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 7 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs25627951,2
    C,F,A,H--26329554(+) CTGGGT/ATTACA 3 -- us2k14Minor allele frequency- A:0.29NA WA CSA 7
    rs1176783071,2
    F--26329648(+) CCTGAT/CGATCC 3 -- us2k11Minor allele frequency- C:0.09EA 120
    rs1894942611,2
    --26329733(+) ACCACC/TGTAGA 3 -- us2k10--------
    rs1924844571,2
    --26329791(+) AACCTA/GAAAAA 3 -- us2k10--------
    rs413472441,2
    C,F,H--26329808(-) CTTAAG/CTGATG 3 -- us2k123Minor allele frequency- C:0.14NS EA NA 2376
    rs1410331501,2
    --26329817(+) AGTTTC/GCTGGA 3 -- us2k10--------
    rs102436601,2
    C--26330145(+) CCGCGC/ACCGGC 3 -- us2k12Minor allele frequency- A:0.00NA 4
    rs1836321551,2
    --26330200(+) AAATGA/GCTTTC 3 -- us2k10--------
    rs715217591,2
    C--26330450(+) CTGGAG/ATGCAA 3 -- us2k11Minor allele frequency- A:0.50NA 2
    rs1893019041,2
    --26330783(+) GTGATC/TGAGGG 3 -- us2k10--------

    HapMap Linkage Disequilibrium report for SNX10 (26331515 - 26413949 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 2 variations for SNX10
         1 CNV: 99899
         1 Indel: 12917
    Human Gene Mutation Database (HGMD): SNX10

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SNX10
    DNA2.0 Custom Variant and Variant Library Synthesis for SNX10

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    SNX10 for disorders           About MalaCards

    SNX10 for disorders           About GeneDecksing

    OMIM gene information: 614780    OMIM disorders: --

    1 disease from the University of Copenhagen DISEASES database for SNX10:
    Osteopetrosis

    Export disorders for SNX10 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for SNX10 gene, integrated from 9 sources (see all 15):
    (articles sorted by number of sources associating them with SNX10)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Sorting nexin 10 induces giant vacuoles in mammalian cells. (PubMed id 17012226)1, 2, 3, 9 Qin B....Pei D. (2006)
    2. Human chromosome 7: DNA sequence and biology. (PubMed id 12690205)1, 2 Scherer S.W.... Tsui L.-C. (2003)
    3. The DNA sequence of human chromosome 7. (PubMed id 12853948)1, 2 Hillier L.W.... Wilson R.K. (2003)
    4. A large family of endosome-localized proteins related to sorting nexin 1. (PubMed id 11485546)1, 2 Teasdale R.D.... Gleeson P.A. (2001)
    5. An SNX10 mutation causes malignant osteopetrosis of in fancy. (PubMed id 22499339)1 Aker M....Elpeleg O. (2012)
    6. A SNX10/V-ATPase pathway regulates ciliogenesis in vit ro and in vivo. (PubMed id 21844891)1 Chen Y....Pei D. (2012)
    7. Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women. (PubMed id 22589738)1 Fox C.S....Borecki I.B. (2012)
    8. SNX10 is required for osteoclast formation and resorpt ion activity. (PubMed id 22174188)1 Zhu C.H....Battaglino R.A. (2012)
    9. Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (2011)
    10. A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 29887 HGNC: 14974 AceView: SNX10 Ensembl:ENSG00000086300 euGenes: HUgn29887
    ECgene: SNX10 H-InvDB: SNX10

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for SNX10 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for SNX10 gene:
    Search GeneIP for patents involving SNX10

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences, In Situ Hybridization Assays from
    Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     Browse OriGene Antibodies   OriGene shRNA RFP for SNX10  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for SNX10   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for SNX10  
     OriGene Protein Over-expression Lysate for SNX10   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for SNX10   OriGene 3'-UTR Clone for SNX10  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for SNX10  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     OriGene Purified Protein for SNX10   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for SNX10   OriGene Custom Protein Services for SNX10  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat SNX10
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing SNX10
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat SNX10
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat SNX10
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat SNX10
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat SNX10
     GenScript Custom Purified and Recombinant Proteins Services for SNX10 GenScript cDNA clones with any tag delivered in your preferred vector for SNX10
     GenScript Custom Assay Services for SNX10 GenScript Custom Superior Antibodies Services for SNX10
     GenScript Custom overexpressing Cell Line Services for SNX10 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Search for Antibodies & Assays

     Regulatory tfbs in SNX10 promoter
     Search Chromatin IP Primers for SNX10
     RT2 qPCR Primer Assay in human, mouse, rat SNX10
     Search GNC Networks for SNX10
     SABiosciences Custom PCR Arrays for SNX10
     Search Tocris compounds for SNX10
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     SNX10 antibodies
     SNX10 proteins
     SNX10 lysates
     Antibodies for SNX10
     See all of Abcam's Antibodies, Kits and Proteins for SNX10
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     SNX10 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for SNX10
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for SNX10
     SwitchGear 3'UTR luciferase reporter plasmids for SNX10
     SwitchGear Promoter luciferase reporter plasmids for SNX10
     Search ThermoFisher Antibodies for SNX10
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat SNX10
     inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for SNX10
    Sirion Biotech Customized:
     stable knockdown cell line services for SNX10
     inducible knockdown cell line services for SNX10
     design and validation of potent shRNA sequences against SNX10
     adenovirus for potent knockdown of SNX10
     adenovirus for overexpression of SNX10
     stable overexpressing cell line services for SNX10
     inducible overexpressing cell line services for SNX10
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013 , 14 May 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      SNX10 gene at Home site.
    hostname: 356980-web2.xennexinc.com index build: 106 solr: 1.4