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Aliases for SNRPEP9 Gene

Subcategory (RNA class) for SNRPEP9 Gene

lncRNA

Aliases for SNRPEP9 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 9 2 3 5

External Ids for SNRPEP9 Gene

ORGUL Members for SNRPEP9 Gene

Summaries for SNRPEP9 Gene

GeneCards Summary for SNRPEP9 Gene

SNRPEP9 (Small Nuclear Ribonucleoprotein Polypeptide E Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPEP9 Gene

Genomics for SNRPEP9 Gene

Regulatory Elements for SNRPEP9 Gene

Enhancers for SNRPEP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF024476 1.5 FANTOM5 Ensembl ENCODE 0.3 -34.1 -34083 5.8 PKNOX1 ZNF133 ZNF76 ARID4B FEZF1 ZNF2 RAD21 ZBTB40 YY1 ZNF366 PDK3 ENSG00000260822 ZFX SNRPEP9
GH0XF024493 1.1 Ensembl ENCODE 0.3 -18.8 -18779 2.2 PKNOX1 ZNF133 ZNF76 ARID4B FEZF1 ZNF2 YY1 ZNF366 ETV6 FOS ENSG00000260822 SNRPEP9 PDK3
GH0XF024473 0.9 Ensembl 0.3 -39.4 -39401 0.8 ZFP64 ZNF493 ZNF121 ZNF138 ZNF354C FOS ZNF202 ZNF680 ZNF654 REST RPL9P7 POLA1 EIF2S3 PDK3 SNRPEP9
GH0XF024516 0.3 FANTOM5 0.8 +3.6 3588 0.4 SNRPEP9 ENSG00000260822
GH0XF024499 0.6 ENCODE 0.4 -14.2 -14229 0.2 CTCF ZNF654 SMC3 ZEB2 RAD21 SNRPEP9 PDK3
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNRPEP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNRPEP9 Gene

Chromosome:
X
Start:
24,513,407 bp from pter
End:
24,513,687 bp from pter
Size:
281 bases
Orientation:
Plus strand

Genomic View for SNRPEP9 Gene

Genes around SNRPEP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPEP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPEP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPEP9 Gene

Proteins for SNRPEP9 Gene

Post-translational modifications for SNRPEP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPEP9 Gene

Domains & Families for SNRPEP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNRPEP9 Gene

Function for SNRPEP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPEP9 Gene

Localization for SNRPEP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNRPEP9 Gene

Pathways & Interactions for SNRPEP9 Gene

SuperPathways for SNRPEP9 Gene

No Data Available

Interacting Proteins for SNRPEP9 Gene

Gene Ontology (GO) - Biological Process for SNRPEP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPEP9 Gene

Transcripts for SNRPEP9 Gene

mRNA/cDNA for SNRPEP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPEP9 Gene

No ASD Table

Relevant External Links for SNRPEP9 Gene

GeneLoc Exon Structure for
SNRPEP9
ECgene alternative splicing isoforms for
SNRPEP9

Expression for SNRPEP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRPEP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPEP9 Gene:

SNRPEP9
genes like me logo Genes that share expression patterns with SNRPEP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNRPEP9 Gene

Orthologs for SNRPEP9 Gene

Evolution for SNRPEP9 Gene

ENSEMBL:
Gene Tree for SNRPEP9 (if available)
TreeFam:
Gene Tree for SNRPEP9 (if available)

No data available for Orthologs for SNRPEP9 Gene

Paralogs for SNRPEP9 Gene

No data available for Paralogs for SNRPEP9 Gene

Variants for SNRPEP9 Gene

Relevant External Links for SNRPEP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPEP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPEP9 Gene

Disorders for SNRPEP9 Gene

No disorders were found for SNRPEP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPEP9 Gene

Publications for SNRPEP9 Gene

No publications were found for SNRPEP9 Gene.

Products for SNRPEP9 Gene

Sources for SNRPEP9 Gene

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