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Aliases for SNRPCP16 Gene

Subcategory (RNA class) for SNRPCP16 Gene

lncRNA

Aliases for SNRPCP16 Gene

  • Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16 2 3 5

External Ids for SNRPCP16 Gene

ORGUL Members for SNRPCP16 Gene

Previous GeneCards Identifiers for SNRPCP16 Gene

  • GC00U935822

Summaries for SNRPCP16 Gene

GeneCards Summary for SNRPCP16 Gene

SNRPCP16 (Small Nuclear Ribonucleoprotein Polypeptide C Pseudogene 16) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for SNRPCP16 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRPCP16 Gene

Genomics for SNRPCP16 Gene

Regulatory Elements for SNRPCP16 Gene

Enhancers for SNRPCP16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H009072 0.7 Ensembl ENCODE 7.8 -21.0 -21024 0 RFX1 BMI1 SNRPCP16 OR7E84P ENPP7P10
GH04H009123 0.7 Ensembl 5.7 -71.6 -71645 0 CTCF ZNF654 FOXA2 REST ZNF2 RAD21 FOXA1 ZNF217 ZNF316 FOXK2 SNRPCP16 GC04M009091 FAM86KP
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNRPCP16 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNRPCP16 Gene

Chromosome:
4
Start:
9,051,842 bp from pter
End:
9,052,051 bp from pter
Size:
210 bases
Orientation:
Minus strand

Genomic View for SNRPCP16 Gene

Genes around SNRPCP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRPCP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRPCP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRPCP16 Gene

Proteins for SNRPCP16 Gene

Post-translational modifications for SNRPCP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRPCP16 Gene

Domains & Families for SNRPCP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNRPCP16 Gene

Function for SNRPCP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRPCP16 Gene

Localization for SNRPCP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNRPCP16 Gene

Pathways & Interactions for SNRPCP16 Gene

SuperPathways for SNRPCP16 Gene

No Data Available

Interacting Proteins for SNRPCP16 Gene

Gene Ontology (GO) - Biological Process for SNRPCP16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNRPCP16 Gene

Drugs & Compounds for SNRPCP16 Gene

No Compound Related Data Available

Transcripts for SNRPCP16 Gene

mRNA/cDNA for SNRPCP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNRPCP16 Gene

No ASD Table

Relevant External Links for SNRPCP16 Gene

GeneLoc Exon Structure for
SNRPCP16
ECgene alternative splicing isoforms for
SNRPCP16

Expression for SNRPCP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNRPCP16 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNRPCP16 Gene:

SNRPCP16
genes like me logo Genes that share expression patterns with SNRPCP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNRPCP16 Gene

Orthologs for SNRPCP16 Gene

Evolution for SNRPCP16 Gene

ENSEMBL:
Gene Tree for SNRPCP16 (if available)
TreeFam:
Gene Tree for SNRPCP16 (if available)

No data available for Orthologs for SNRPCP16 Gene

Paralogs for SNRPCP16 Gene

No data available for Paralogs for SNRPCP16 Gene

Variants for SNRPCP16 Gene

Relevant External Links for SNRPCP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNRPCP16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNRPCP16 Gene

Disorders for SNRPCP16 Gene

No disorders were found for SNRPCP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNRPCP16 Gene

Publications for SNRPCP16 Gene

No publications were found for SNRPCP16 Gene.

Products for SNRPCP16 Gene

Sources for SNRPCP16 Gene

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