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Aliases for SNRK-AS1 Gene

Subcategory (RNA class) for SNRK-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNRK-AS1 Gene

  • SNRK Antisense RNA 1 2 3 5
  • SNRK Antisense RNA 1 (Non-Protein Coding) 2

External Ids for SNRK-AS1 Gene

Previous GeneCards Identifiers for SNRK-AS1 Gene

  • GC00U933780

Summaries for SNRK-AS1 Gene

GeneCards Summary for SNRK-AS1 Gene

SNRK-AS1 (SNRK Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNRK-AS1 Gene

Genomics for SNRK-AS1 Gene

Regulatory Elements for SNRK-AS1 Gene

Enhancers for SNRK-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F043388 1.5 FANTOM5 Ensembl ENCODE 17.1 -37.7 -37711 4.9 ZBTB40 RAD21 YY1 GATA2 ETV6 ZBTB11 ELF1 NR2F2 SMARCA4 IKZF1 SNRK ABHD5 SNRK-AS1 ENSG00000271941 ANO10 ENSG00000251811
GH03F043392 1.1 FANTOM5 Ensembl ENCODE 16.3 -42.1 -42074 2.5 ETV1 JUN ZNF175 MYC NR2F2 SNRK SNRK-AS1 ABHD5 ANO10 ENSG00000251811
GH03F043176 1.6 FANTOM5 Ensembl ENCODE 9.8 +172.2 172162 6.4 MLX ARID4B YY1 GTF3C2 SLC30A9 FOS JUNB MIER2 REST TBX21 SNRK-AS1 HIGD1A ACKR2 CCDC13 SNRK GC03P043189 LOC105377051
GH03F043316 1.2 Ensembl ENCODE 12 +34.2 34162 2.4 ELF3 ATF1 RAD21 DNMT3B RARA YY1 GATA4 CREM MIXL1 SP5 SNRK-AS1 SNRK ABHD5 RN7SL517P ENSG00000271941
GH03F043324 1 Ensembl ENCODE 13 +25.5 25462 5.0 CTCF HDAC1 KLF1 PKNOX1 HLF NR2F1 MAFG CEBPB ZNF316 PBX2 SNRK-AS1 SNRK ANO10 RN7SL517P ENSG00000271941
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNRK-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNRK-AS1 Gene

43,346,919 bp from pter
43,351,962 bp from pter
5,044 bases
Minus strand

Genomic View for SNRK-AS1 Gene

Genes around SNRK-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNRK-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNRK-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNRK-AS1 Gene

Proteins for SNRK-AS1 Gene

Post-translational modifications for SNRK-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNRK-AS1 Gene

Domains & Families for SNRK-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNRK-AS1 Gene

Function for SNRK-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNRK-AS1 Gene

Localization for SNRK-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNRK-AS1 Gene

Pathways & Interactions for SNRK-AS1 Gene

SuperPathways for SNRK-AS1 Gene

No Data Available

Interacting Proteins for SNRK-AS1 Gene

Gene Ontology (GO) - Biological Process for SNRK-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNRK-AS1 Gene

Transcripts for SNRK-AS1 Gene

mRNA/cDNA for SNRK-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for SNRK-AS1 Gene

SNRK antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for SNRK-AS1 Gene

No ASD Table

Relevant External Links for SNRK-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNRK-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNRK-AS1 Gene

SOURCE GeneReport for Unigene cluster for SNRK-AS1 Gene:

genes like me logo Genes that share expression patterns with SNRK-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNRK-AS1 Gene

Orthologs for SNRK-AS1 Gene

Evolution for SNRK-AS1 Gene

Gene Tree for SNRK-AS1 (if available)
Gene Tree for SNRK-AS1 (if available)

No data available for Orthologs for SNRK-AS1 Gene

Paralogs for SNRK-AS1 Gene

No data available for Paralogs for SNRK-AS1 Gene

Variants for SNRK-AS1 Gene

Sequence variations from dbSNP and Humsavar for SNRK-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1050584 -- 43,348,793(+) TTAAT(G/T)TGGAT nc-transcript-variant, utr-variant-3-prime
rs11130000 -- 43,346,442(+) GCCTC(A/C)TTTAA intron-variant, downstream-variant-500B
rs112105022 -- 43,351,340(+) TTTCT(C/T)TATTT intron-variant, nc-transcript-variant, downstream-variant-500B
rs112435782 -- 43,351,556(+) CCCCC(C/G)CCGCC intron-variant, downstream-variant-500B
rs112649728 -- 43,351,550(+) TACAA(A/C)CCCCC intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNRK-AS1 Gene

Variant ID Type Subtype PubMed ID
esv3596011 CNV gain 21293372

Relevant External Links for SNRK-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNRK-AS1 Gene

Disorders for SNRK-AS1 Gene

Relevant External Links for SNRK-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNRK-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNRK-AS1 Gene

Publications for SNRK-AS1 Gene

No publications were found for SNRK-AS1 Gene.

Products for SNRK-AS1 Gene

Sources for SNRK-AS1 Gene

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