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Aliases for SNORD98 Gene

Subcategory (RNA class) for SNORD98 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD98 Gene

  • Small Nucleolar RNA, C/D Box 98 2 3
  • HBII-419 3

External Ids for SNORD98 Gene

ORGUL Members for SNORD98 Gene

Previous GeneCards Identifiers for SNORD98 Gene

  • GC10U900647
  • GC10P070185
  • GC10P070514
  • GC10P064516

Summaries for SNORD98 Gene

GeneCards Summary for SNORD98 Gene

SNORD98 (Small Nucleolar RNA, C/D Box 98) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD98 Gene

Genomics for SNORD98 Gene

Regulatory Elements for SNORD98 Gene

Genomic Location for SNORD98 Gene

Start:
68,755,172 bp from pter
End:
68,755,238 bp from pter
Size:
67 bases
Orientation:
Plus strand

Genomic View for SNORD98 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD98 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD98 Gene

Proteins for SNORD98 Gene

Post-translational modifications for SNORD98 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD98 Gene

Domains for SNORD98 Gene

Gene Families for SNORD98 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD98: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD98 Gene

Function for SNORD98 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD98 Gene

Localization for SNORD98 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD98 Gene

Pathways for SNORD98 Gene

SuperPathways for SNORD98 Gene

No Data Available

Interacting Proteins for SNORD98 Gene

Gene Ontology (GO) - Biological Process for SNORD98 Gene

None

No data available for Pathways by source for SNORD98 Gene

Transcripts for SNORD98 Gene

mRNA/cDNA for SNORD98 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD98 Gene

No ASD Table

Relevant External Links for SNORD98 Gene

GeneLoc Exon Structure for
SNORD98
ECgene alternative splicing isoforms for
SNORD98

Expression for SNORD98 Gene

mRNA expression in normal human tissues for SNORD98 Gene

genes like me logo Genes that share expressions with SNORD98: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD98 Gene

Orthologs for SNORD98 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD98 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORD98 36
  • 95 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord98 16
Snord98 36
  • 98 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD98 36
  • 89 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD98 36
  • 81 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD98 36
  • 79 (a)
OneToOne
Species with no ortholog for SNORD98:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD98 Gene

ENSEMBL:
Gene Tree for SNORD98 (if available)
TreeFam:
Gene Tree for SNORD98 (if available)

Paralogs for SNORD98 Gene

No data available for Paralogs for SNORD98 Gene

Variants for SNORD98 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD98 Gene

Variant ID Type Subtype PubMed ID
dgv296e1 CNV Complex 17122850

Relevant External Links for SNORD98 Gene

HapMap Linkage Disequilibrium report
SNORD98

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD98 Gene

Disorders for SNORD98 Gene

No disorders were found for SNORD98 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD98 Gene

Publications for SNORD98 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD98 Gene

Sources for SNORD98 Gene

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