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Aliases for SNORD96B Gene

Subcategory (RNA class) for SNORD96B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD96B Gene

  • Small Nucleolar RNA, C/D Box 96B 2 3
  • U96b 3

External Ids for SNORD96B Gene

ORGUL Members for SNORD96B Gene

Previous GeneCards Identifiers for SNORD96B Gene

  • GC0XU900658
  • GC0XM109355
  • GC0XM109468
  • GC0XM099088

Summaries for SNORD96B Gene

GeneCards Summary for SNORD96B Gene

SNORD96B (Small Nucleolar RNA, C/D Box 96B) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD96B Gene

Genomics for SNORD96B Gene

Regulatory Elements for SNORD96B Gene

Genomic Location for SNORD96B Gene

Start:
110,224,985 bp from pter
End:
110,225,063 bp from pter
Size:
79 bases
Orientation:
Minus strand

Genomic View for SNORD96B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD96B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD96B Gene

Proteins for SNORD96B Gene

Post-translational modifications for SNORD96B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD96B Gene

Domains for SNORD96B Gene

Gene Families for SNORD96B Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD96B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD96B Gene

Function for SNORD96B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD96B Gene

Localization for SNORD96B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD96B Gene

Pathways for SNORD96B Gene

SuperPathways for SNORD96B Gene

No Data Available

Interacting Proteins for SNORD96B Gene

Gene Ontology (GO) - Biological Process for SNORD96B Gene

None

No data available for Pathways by source for SNORD96B Gene

Transcripts for SNORD96B Gene

mRNA/cDNA for SNORD96B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD96B Gene

No ASD Table

Relevant External Links for SNORD96B Gene

GeneLoc Exon Structure for
SNORD96B
ECgene alternative splicing isoforms for
SNORD96B

Expression for SNORD96B Gene

mRNA expression in normal human tissues for SNORD96B Gene

genes like me logo Genes that share expressions with SNORD96B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD96B Gene

Orthologs for SNORD96B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD96B Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD96 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD96 36
  • 94 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORD96 36
  • 89 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Snord96a 36
  • 84 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORD96 36
  • 72 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD96 36
  • 63 (a)
OneToMany
Species with no ortholog for SNORD96B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD96B Gene

ENSEMBL:
Gene Tree for SNORD96B (if available)
TreeFam:
Gene Tree for SNORD96B (if available)

Paralogs for SNORD96B Gene

No data available for Paralogs for SNORD96B Gene

Variants for SNORD96B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD96B Gene

Variant ID Type Subtype PubMed ID
nsv518116 CNV Gain 19592680

Relevant External Links for SNORD96B Gene

HapMap Linkage Disequilibrium report
SNORD96B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD96B Gene

Disorders for SNORD96B Gene

No disorders were found for SNORD96B Gene.

No data available for UniProtKB/Swiss-Prot for SNORD96B Gene

Publications for SNORD96B Gene

  1. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P. … CavaillAc J. (Nucleic Acids Res. 2003) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD96B Gene

Sources for SNORD96B Gene

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