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Aliases for SNORD95 Gene

Subcategory (RNA class) for SNORD95 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD95 Gene

  • Small Nucleolar RNA, C/D Box 95 2 3 5
  • C/D Box SnoRNA U95 3
  • U95 3

External Ids for SNORD95 Gene

ORGUL Members for SNORD95 Gene

Previous GeneCards Identifiers for SNORD95 Gene

  • GC05M180605
  • GC05M180670
  • GC05M175397

Summaries for SNORD95 Gene

GeneCards Summary for SNORD95 Gene

SNORD95 (Small Nucleolar RNA, C/D Box 95) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD95 Gene

Genomics for SNORD95 Gene

Regulatory Elements for SNORD95 Gene


Promoters for SNORD95 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001877235 -321 2601 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 YBX1 ZNF2

Genomic Location for SNORD95 Gene

Chromosome:
5
Start:
181,243,312 bp from pter
End:
181,243,379 bp from pter
Size:
68 bases
Orientation:
Minus strand

Genomic View for SNORD95 Gene

Genes around SNORD95 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD95 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD95 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD95 Gene

Proteins for SNORD95 Gene

Post-translational modifications for SNORD95 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD95 Gene

Domains & Families for SNORD95 Gene

Gene Families for SNORD95 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD95: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD95 Gene

Function for SNORD95 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD95 Gene

Localization for SNORD95 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD95 Gene

Pathways & Interactions for SNORD95 Gene

SuperPathways for SNORD95 Gene

No Data Available

Interacting Proteins for SNORD95 Gene

Gene Ontology (GO) - Biological Process for SNORD95 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD95 Gene

Transcripts for SNORD95 Gene

mRNA/cDNA for SNORD95 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD95 Gene

No ASD Table

Relevant External Links for SNORD95 Gene

GeneLoc Exon Structure for
SNORD95
ECgene alternative splicing isoforms for
SNORD95

Expression for SNORD95 Gene

mRNA expression in normal human tissues for SNORD95 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD95 Gene:

SNORD95
genes like me logo Genes that share expression patterns with SNORD95: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD95 Gene

Orthologs for SNORD95 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD95 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD95 35
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD95 35
  • 91 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm25296 35
  • 91 (a)
OneToMany
Snord95 35
  • 85 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORD95 35
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD95 35
  • 78 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD95 35 35 35
  • 71 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORD95 35
  • 72 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD95 35
  • 69 (a)
OneToMany
Species where no ortholog for SNORD95 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD95 Gene

ENSEMBL:
Gene Tree for SNORD95 (if available)
TreeFam:
Gene Tree for SNORD95 (if available)

Paralogs for SNORD95 Gene

No data available for Paralogs for SNORD95 Gene

Variants for SNORD95 Gene

Sequence variations from dbSNP and Humsavar for SNORD95 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1059315 -- 181,243,851(-) CTAAG(C/G)CATCC upstream-variant-2KB, utr-variant-5-prime
rs111326428 -- 181,243,160(+) GTGTA(A/G)CAGCA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs11249778 -- 181,243,095(-) TTGAG(G/T)GGGAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs11249779 -- 181,243,801(-) GCCGC(C/G/T)ATGAC upstream-variant-2KB, utr-variant-5-prime
rs113011333 -- 181,243,691(+) CCGTA(C/T)CTCGA upstream-variant-2KB, splice-donor-variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD95 Gene

Variant ID Type Subtype PubMed ID
dgv1155e214 CNV gain 21293372
dgv1156e214 CNV loss 21293372
nsv1028730 CNV gain 25217958
nsv428133 CNV gain 18775914
nsv462591 CNV loss 19166990
nsv517697 CNV loss 19592680
nsv600731 CNV loss 21841781
nsv830567 CNV loss 17160897

Relevant External Links for SNORD95 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD95

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD95 Gene

Disorders for SNORD95 Gene

Relevant External Links for SNORD95

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD95

No disorders were found for SNORD95 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD95 Gene

Publications for SNORD95 Gene

  1. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P. … CavaillAc J. (Nucleic Acids Res. 2003) 2 3 64
  2. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD95 Gene

Sources for SNORD95 Gene

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