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Aliases for SNORD94 Gene

Subcategory (RNA class) for SNORD94 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD94 Gene

  • Small Nucleolar RNA, C/D Box 94 2 3
  • U94 3

External Ids for SNORD94 Gene

ORGUL Members for SNORD94 Gene

Previous GeneCards Identifiers for SNORD94 Gene

  • GC02U900837
  • GC02P086217
  • GC02P086362

Summaries for SNORD94 Gene

GeneCards Summary for SNORD94 Gene

SNORD94 (Small Nucleolar RNA, C/D Box 94) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD94 Gene

Genomics for SNORD94 Gene

Regulatory Elements for SNORD94 Gene

Genomic Location for SNORD94 Gene

Start:
86,135,870 bp from pter
End:
86,136,006 bp from pter
Size:
137 bases
Orientation:
Plus strand

Genomic View for SNORD94 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD94 Gene

Proteins for SNORD94 Gene

Post-translational modifications for SNORD94 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD94 Gene

Domains for SNORD94 Gene

Gene Families for SNORD94 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD94: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD94 Gene

Function for SNORD94 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD94 Gene

Localization for SNORD94 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD94 Gene

Pathways for SNORD94 Gene

SuperPathways for SNORD94 Gene

No Data Available

Interacting Proteins for SNORD94 Gene

Gene Ontology (GO) - Biological Process for SNORD94 Gene

None

No data available for Pathways by source for SNORD94 Gene

Transcripts for SNORD94 Gene

mRNA/cDNA for SNORD94 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD94

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD94 Gene

No ASD Table

Relevant External Links for SNORD94 Gene

GeneLoc Exon Structure for
SNORD94
ECgene alternative splicing isoforms for
SNORD94

Expression for SNORD94 Gene

mRNA expression in normal human tissues for SNORD94 Gene

SOURCE GeneReport for Unigene cluster for SNORD94 Gene Hs.723087

genes like me logo Genes that share expressions with SNORD94: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD94 Gene

Orthologs for SNORD94 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD94 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD94 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD94 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD94 36
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22486 36
  • 93 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD94 36
  • 91 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD94 36
  • 69 (a)
OneToMany
SNORD94 36
  • 69 (a)
OneToMany
SNORD94 36
  • 83 (a)
OneToMany
SNORD94 36
  • 83 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORD94 36
  • 67 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD94 36
  • 68 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD94 36
  • 64 (a)
OneToOne
Species with no ortholog for SNORD94:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD94 Gene

ENSEMBL:
Gene Tree for SNORD94 (if available)
TreeFam:
Gene Tree for SNORD94 (if available)

Paralogs for SNORD94 Gene

No data available for Paralogs for SNORD94 Gene

Variants for SNORD94 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD94 Gene

Variant ID Type Subtype PubMed ID
esv2751903 CNV Gain 17911159
nsv458563 CNV Gain 19166990

Relevant External Links for SNORD94 Gene

HapMap Linkage Disequilibrium report
SNORD94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD94 Gene

Disorders for SNORD94 Gene

No disorders were found for SNORD94 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD94 Gene

Publications for SNORD94 Gene

  1. Identification of 13 novel human modification guide RNAs. (PMID: 14602913) Vitali P. … CavaillAc J. (Nucleic Acids Res. 2003) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD94 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORD94
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD94
    • Block miRNA regulation of SNORD94 using miScript Target Protectors

    Sources for SNORD94 Gene

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