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Aliases for SNORD93 Gene

Subcategory (RNA class) for SNORD93 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD93 Gene

  • Small Nucleolar RNA, C/D Box 93 2 3
  • HBII-336 3

External Ids for SNORD93 Gene

ORGUL Members for SNORD93 Gene

Summaries for SNORD93 Gene

GeneCards Summary for SNORD93 Gene

SNORD93 (Small Nucleolar RNA, C/D Box 93) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD93 Gene

Genomics for SNORD93 Gene

Genomic Location for SNORD93 Gene

Start:
22,856,613 bp from pter
End:
22,856,686 bp from pter
Size:
74 bases
Orientation:
Plus strand

Genomic View for SNORD93 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD93 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD93 Gene

Regulatory Elements for SNORD93 Gene

Proteins for SNORD93 Gene

Post-translational modifications for SNORD93 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD93 Gene

Domains for SNORD93 Gene

Gene Families for SNORD93 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORD93: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORD93 Gene

Function for SNORD93 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD93 Gene

Localization for SNORD93 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORD93 Gene

Pathways for SNORD93 Gene

SuperPathways for SNORD93 Gene

No Data Available

Interacting Proteins for SNORD93 Gene

Gene Ontology (GO) - Biological Process for SNORD93 Gene

None

No data available for Pathways by source for SNORD93 Gene

Transcripts for SNORD93 Gene

mRNA/cDNA for SNORD93 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD93 Gene

No ASD Table

Relevant External Links for SNORD93 Gene

GeneLoc Exon Structure for
SNORD93
ECgene alternative splicing isoforms for
SNORD93

Expression for SNORD93 Gene

mRNA expression in normal human tissues for SNORD93 Gene

genes like me logo Genes that share expressions with SNORD93: view

Orthologs for SNORD93 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD93 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD93 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD93 37
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD93 37
  • 86 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Mir3096 37
  • 89 (a)
OneToMany
Snord93 16
Snord93 37
  • 90 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia SNORD93 37
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD93 37
  • 70 (a)
OneToMany
SNORD93 37
  • 72 (a)
OneToMany
SNORD93 37
  • 72 (a)
OneToMany
SNORD93 37
  • 70 (a)
OneToMany
chicken
(Gallus gallus)
Aves SNORD93 37
  • 65 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD93 37
  • 62 (a)
OneToOne
Species with no ortholog for SNORD93:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD93 Gene

ENSEMBL:
Gene Tree for SNORD93 (if available)
TreeFam:
Gene Tree for SNORD93 (if available)

Paralogs for SNORD93 Gene

No data available for Paralogs for SNORD93 Gene

Variants for SNORD93 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD93 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER Inversion 18451855
dgv2070e1 CNV Complex 17122850
nsv526131 CNV Loss 19592680

Relevant External Links for SNORD93 Gene

HapMap Linkage Disequilibrium report
SNORD93

No data available for Sequence variations from dbSNP and Humsavar for SNORD93 Gene

Disorders for SNORD93 Gene

No disorders were found for SNORD93 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD93 Gene

Publications for SNORD93 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD93 Gene

Sources for SNORD93 Gene

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