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Aliases for SNORD93 Gene

Subcategory (RNA class) for SNORD93 Gene


Quality Score for this RNA gene is


Aliases for SNORD93 Gene

  • Small Nucleolar RNA, C/D Box 93 2 3 5
  • HBII-336 3

External Ids for SNORD93 Gene

ORGUL Members for SNORD93 Gene

Previous GeneCards Identifiers for SNORD93 Gene

  • GC07U901574
  • GC07P022864
  • GC07P022780
  • GC07P022896
  • GC07P022857

Summaries for SNORD93 Gene

GeneCards Summary for SNORD93 Gene

SNORD93 (Small Nucleolar RNA, C/D Box 93) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD93 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD93 Gene

Genomics for SNORD93 Gene

Regulatory Elements for SNORD93 Gene

Enhancers for SNORD93 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H022852 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +0.3 260 8.9 PKNOX1 MLX ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 FOS SP3 TOMM7 SNHG26 TRA2A NUPL2 FAM126A LOC541472 IL6 ENSG00000226329 STEAP1B SNORD93
GH07H022862 1.2 Ensembl ENCODE dbSUPER 0.4 +8.8 8847 5.9 EBF1 RAD21 YY1 JUND POLR2A BCL11A IKZF1 HNF4G HNF4A NFE2 SNHG26 TOMM7 FAM126A ENSG00000226329 SNORD93
GH07H022871 1 Ensembl ENCODE 0.4 +15.7 15691 0.8 PKNOX1 IRF3 EBF1 RFX5 GATA3 RFXANK ZNF143 FOS ATF7 CREM SNHG26 FAM126A ENSG00000226329 SNORD93
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD93 on UCSC Golden Path with GeneCards custom track

Promoters for SNORD93 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000209436 -1813 2001 PKNOX1 MLX ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 SP3 SP5

Genomic Locations for SNORD93 Gene

Genomic Locations for SNORD93 Gene
74 bases
Plus strand

Genomic View for SNORD93 Gene

Genes around SNORD93 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD93 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD93 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD93 Gene

Proteins for SNORD93 Gene

Post-translational modifications for SNORD93 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD93 Gene

Domains & Families for SNORD93 Gene

Gene Families for SNORD93 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD93: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD93 Gene

Function for SNORD93 Gene

Phenotypes From GWAS Catalog for SNORD93 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD93 Gene

Localization for SNORD93 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD93 Gene

Pathways & Interactions for SNORD93 Gene

SuperPathways for SNORD93 Gene

No Data Available

Interacting Proteins for SNORD93 Gene

Gene Ontology (GO) - Biological Process for SNORD93 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD93 Gene

Drugs & Compounds for SNORD93 Gene

No Compound Related Data Available

Transcripts for SNORD93 Gene

mRNA/cDNA for SNORD93 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD93 Gene

No ASD Table

Relevant External Links for SNORD93 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD93 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD93 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD93 Gene:

genes like me logo Genes that share expression patterns with SNORD93: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD93 Gene

Orthologs for SNORD93 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD93 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD93 34
  • 100 (a)
(Mus musculus)
Mammalia Snord93 34
  • 90 (a)
Mir3096 34
  • 89 (a)
(Bos Taurus)
Mammalia SNORD93 34
  • 89 (a)
(Canis familiaris)
Mammalia SNORD93 34
  • 86 (a)
(Monodelphis domestica)
Mammalia SNORD93 34
  • 79 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD93 34 34 34 34
  • 70 (a)
(Gallus gallus)
Aves SNORD93 34
  • 65 (a)
(Anolis carolinensis)
Reptilia SNORD93 34
  • 62 (a)
Species where no ortholog for SNORD93 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD93 Gene

Gene Tree for SNORD93 (if available)
Gene Tree for SNORD93 (if available)

Paralogs for SNORD93 Gene

No data available for Paralogs for SNORD93 Gene

Variants for SNORD93 Gene

Sequence variations from dbSNP and Humsavar for SNORD93 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000804413 -- 22,855,733(+) TTTTA(G/T)TTTAT upstream-variant-2KB
rs1000856679 -- 22,855,471(+) AAGAT(G/T)TGCTG upstream-variant-2KB
rs1001358966 -- 22,854,786(+) GATGT(C/G)TGAAG upstream-variant-2KB
rs1003424465 -- 22,856,195(+) TAGTG(C/G)TTCCT upstream-variant-2KB
rs1004457203 -- 22,857,162(+) GGAGA(C/T)ACAAA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for SNORD93 Gene

Variant ID Type Subtype PubMed ID
nsv7393 OTHER inversion 18451855
nsv526131 CNV loss 19592680
nsv1027363 CNV gain 25217958
nsv1026020 CNV loss 25217958
esv2759518 CNV loss 17122850

Relevant External Links for SNORD93 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD93 Gene

Disorders for SNORD93 Gene

Relevant External Links for SNORD93

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD93 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD93 Gene

Publications for SNORD93 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60

Products for SNORD93 Gene

Sources for SNORD93 Gene

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