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Aliases for SNORD91A Gene

Subcategory (RNA class) for SNORD91A Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNORD91A Gene

  • Small Nucleolar RNA, C/D Box 91A 2 3 5
  • HBII-296a 3

External Ids for SNORD91A Gene

Previous GeneCards Identifiers for SNORD91A Gene

  • GC17U900622
  • GC17M002180
  • GC17M002233

Summaries for SNORD91A Gene

GeneCards Summary for SNORD91A Gene

SNORD91A (Small Nucleolar RNA, C/D Box 91A) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD91A Gene

Genomics for SNORD91A Gene

Regulatory Elements for SNORD91A Gene

Enhancers for SNORD91A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F002170 3.2 VISTA FANTOM5 Ensembl ENCODE 10.7 +152.9 152872 13.4 PKNOX1 ATF1 ARID4B SIN3A FEZF1 ZNF48 YY1 ZNF121 ELK1 ZNF143 SRR LOC105371487 HIC1 ENSG00000236457 LOC101927839 OVCA2 SNORD91A SNORD91B SMG6 DPH1
GH17F002053 1.8 FANTOM5 Ensembl ENCODE 10.6 +266.9 266933 20.4 HDGF PKNOX1 WRNIP1 ARID4B SIN3A ZNF2 ZNF143 FOS ZNF263 SP3 DPH1 SMYD4 SRR METTL16 LOC101927839 HNRNPA1P16 LOC105371487 ENSG00000236457 RPA1 ENSG00000263345
GH17F002261 1.5 FANTOM5 Ensembl ENCODE 11.2 +65.3 65281 7.3 TBP PKNOX1 TBL1XR1 WRNIP1 SIN3A KLF17 FEZF1 RAD21 ZNF2 ZBTB40 SRR TSR1 SMG6 LOC101927839 HIC1 OVCA2 ENSG00000236457 LOC105371487 SGSM2 SNORD91B
GH17F002258 1.4 FANTOM5 Ensembl ENCODE 10.6 +70.8 70772 2.9 PKNOX1 EBF1 ZBTB40 RELA POLR2A EED ZNF207 ETV6 CREM MTA2 SRR SMG6 OVCA2 HIC1 ENSG00000236457 LOC105371487 SNORD91B SNORD91A SMYD4 METTL16
GH17F002357 1.2 Ensembl ENCODE 11.3 -28.9 -28887 2.8 TBP PKNOX1 INSM2 ZNF76 KLF17 GLIS2 ZNF366 SCRT2 FOS SMARCC1 SGSM2 MNT TSR1 SNORD91A SNORD91B SMG6 SRR HIC1 OVCA2 METTL16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD91A on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD91A Gene

Chromosome:
17
Start:
2,330,180 bp from pter
End:
2,330,370 bp from pter
Size:
191 bases
Orientation:
Minus strand

Genomic View for SNORD91A Gene

Genes around SNORD91A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD91A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD91A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD91A Gene

Proteins for SNORD91A Gene

Post-translational modifications for SNORD91A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD91A Gene

Domains & Families for SNORD91A Gene

Gene Families for SNORD91A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD91A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD91A Gene

Function for SNORD91A Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD91A Gene

Localization for SNORD91A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD91A Gene

Pathways & Interactions for SNORD91A Gene

SuperPathways for SNORD91A Gene

No Data Available

Interacting Proteins for SNORD91A Gene

Gene Ontology (GO) - Biological Process for SNORD91A Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD91A Gene

Transcripts for SNORD91A Gene

mRNA/cDNA for SNORD91A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD91A Gene

No ASD Table

Relevant External Links for SNORD91A Gene

GeneLoc Exon Structure for
SNORD91A
ECgene alternative splicing isoforms for
SNORD91A

Expression for SNORD91A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORD91A Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD91A Gene:

SNORD91A
genes like me logo Genes that share expression patterns with SNORD91A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD91A Gene

Orthologs for SNORD91A Gene

Evolution for SNORD91A Gene

ENSEMBL:
Gene Tree for SNORD91A (if available)
TreeFam:
Gene Tree for SNORD91A (if available)

No data available for Orthologs for SNORD91A Gene

Paralogs for SNORD91A Gene

No data available for Paralogs for SNORD91A Gene

Variants for SNORD91A Gene

Sequence variations from dbSNP and Humsavar for SNORD91A Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs111475897 -- 2,331,536(+) CTCTC(G/T)TTACT intron-variant, upstream-variant-2KB
rs111973646 -- 2,330,575(+) CACTC(A/G)ACCAC upstream-variant-2KB, reference, synonymous-codon
rs112828615 -- 2,329,964(+) GCCCA(C/G)GCTGG intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113149169 -- 2,330,267(+) GGTCT(A/G)AAAAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113809869 -- 2,330,706(+) TGTTG(A/G)GTCTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD91A Gene

Variant ID Type Subtype PubMed ID
nsv833336 CNV loss 17160897
nsv574224 CNV gain 21841781
nsv469765 CNV loss 16826518
nsv1067416 CNV loss 25217958
nsv1060897 CNV loss 25217958

Relevant External Links for SNORD91A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD91A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD91A Gene

Disorders for SNORD91A Gene

Relevant External Links for SNORD91A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD91A

No disorders were found for SNORD91A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD91A Gene

Publications for SNORD91A Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD91A Gene

Sources for SNORD91A Gene

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