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Aliases for SNORD86 Gene

Subcategory (RNA class) for SNORD86 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD86 Gene

  • Small Nucleolar RNA, C/D Box 86 2 3
  • U86 3

External Ids for SNORD86 Gene

ORGUL Members for SNORD86 Gene

Summaries for SNORD86 Gene

GeneCards Summary for SNORD86 Gene

SNORD86 (Small Nucleolar RNA, C/D Box 86) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD86 Gene

Genomics for SNORD86 Gene

Genomic Location for SNORD86 Gene

Start:
2,656,097 bp from pter
End:
2,656,182 bp from pter
Size:
86 bases
Orientation:
Plus strand

Genomic View for SNORD86 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD86 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD86 Gene

Regulatory Elements for SNORD86 Gene

Proteins for SNORD86 Gene

Post-translational modifications for SNORD86 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD86 Gene

Domains for SNORD86 Gene

Gene Families for SNORD86 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORD86: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORD86 Gene

Function for SNORD86 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD86 Gene

Localization for SNORD86 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORD86 Gene

Pathways for SNORD86 Gene

SuperPathways for SNORD86 Gene

No Data Available

Interacting Proteins for SNORD86 Gene

Gene Ontology (GO) - Biological Process for SNORD86 Gene

None

No data available for Pathways by source for SNORD86 Gene

Transcripts for SNORD86 Gene

mRNA/cDNA for SNORD86 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD86 Gene

No ASD Table

Relevant External Links for SNORD86 Gene

GeneLoc Exon Structure for
SNORD86
ECgene alternative splicing isoforms for
SNORD86

Expression for SNORD86 Gene

mRNA expression in normal human tissues for SNORD86 Gene

genes like me logo Genes that share expressions with SNORD86: view

Orthologs for SNORD86 Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD86 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD86 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD86 37
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD86 37
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm23187 37
  • 94 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD86 37
  • 67 (a)
OneToOne
Species with no ortholog for SNORD86:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD86 Gene

ENSEMBL:
Gene Tree for SNORD86 (if available)
TreeFam:
Gene Tree for SNORD86 (if available)

Paralogs for SNORD86 Gene

No data available for Paralogs for SNORD86 Gene

Variants for SNORD86 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD86 Gene

Variant ID Type Subtype PubMed ID
nsv470535 CNV Gain 18288195

Relevant External Links for SNORD86 Gene

HapMap Linkage Disequilibrium report
SNORD86

No data available for Sequence variations from dbSNP and Humsavar for SNORD86 Gene

Disorders for SNORD86 Gene

No disorders were found for SNORD86 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD86 Gene

Publications for SNORD86 Gene

  1. U86, a novel snoRNA with an unprecedented gene organization in yeast. (PMID: 11594746) Filippini D. … Caffarelli E. (Biochem. Biophys. Res. Commun. 2001) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD86 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate SNORD86
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for SNORD86
    • Block miRNA regulation of SNORD86 using miScript Target Protectors

    Sources for SNORD86 Gene

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