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Aliases for SNORD84 Gene

Subcategory (RNA class) for SNORD84 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for SNORD84 Gene

  • Small Nucleolar RNA, C/D Box 84 2 3
  • U84 3

External Ids for SNORD84 Gene

Previous GeneCards Identifiers for SNORD84 Gene

  • GC06U900829
  • GC06M031623
  • GC06M031625
  • GC06M031497
  • GC06M031508
  • GC06M031544

Summaries for SNORD84 Gene

GeneCards Summary for SNORD84 Gene

SNORD84 (Small Nucleolar RNA, C/D Box 84) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD84 Gene

Genomics for SNORD84 Gene

Regulatory Elements for SNORD84 Gene

Genomic Location for SNORD84 Gene

Chromosome:
6
Start:
31,541,101 bp from pter
End:
31,541,178 bp from pter
Size:
78 bases
Orientation:
Minus strand

Genomic View for SNORD84 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD84 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for SNORD84 Gene

Post-translational modifications for SNORD84 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD84 Gene

Domains & Families for SNORD84 Gene

Gene Families for SNORD84 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD84: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD84 Gene

Function for SNORD84 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD84 Gene

Localization for SNORD84 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD84 Gene

Pathways & Interactions for SNORD84 Gene

SuperPathways for SNORD84 Gene

No Data Available

Interacting Proteins for SNORD84 Gene

Gene Ontology (GO) - Biological Process for SNORD84 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD84 Gene

Drugs & Compounds for SNORD84 Gene

No Compound Related Data Available

Transcripts for SNORD84 Gene

mRNA/cDNA for SNORD84 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD84 Gene

No ASD Table

Relevant External Links for SNORD84 Gene

GeneLoc Exon Structure for
SNORD84
ECgene alternative splicing isoforms for
SNORD84

Expression for SNORD84 Gene

mRNA expression in normal human tissues for SNORD84 Gene

genes like me logo Genes that share expression patterns with SNORD84: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD84 Gene

Orthologs for SNORD84 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD84 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORD83 36
  • 87 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD83 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD83 36
  • 79 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22589 36
  • 86 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD83 36
  • 80 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia SNORD83 36
  • 100 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD83 36
  • 70 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD83 36
  • 63 (a)
ManyToMany
zebrafish
(Danio rerio)
Actinopterygii SNORD83 36
  • 70 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD83 36
  • 75 (a)
ManyToMany
SNORD83 36
  • 72 (a)
ManyToMany
Species with no ortholog for SNORD84:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD84 Gene

ENSEMBL:
Gene Tree for SNORD84 (if available)
TreeFam:
Gene Tree for SNORD84 (if available)

Paralogs for SNORD84 Gene

No data available for Paralogs for SNORD84 Gene

Variants for SNORD84 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD84 Gene

Variant ID Type Subtype PubMed ID
esv690 CNV CNV 17122850
essv13266 CNV CNV 17122850
nsv830627 CNV Loss 17160897
nsv470809 CNV Loss 18288195

Relevant External Links for SNORD84 Gene

HapMap Linkage Disequilibrium report
SNORD84

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD84 Gene

Disorders for SNORD84 Gene

Relevant External Links for SNORD84

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD84
genes like me logo Genes that share disorders with SNORD84: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD84 Gene

Publications for SNORD84 Gene

  1. Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2'-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs. (PMID: 10684929) JA!dy B.E. … Kiss T. (Nucleic Acids Res. 2000) 2 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67

Products for SNORD84 Gene

Sources for SNORD84 Gene

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