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Aliases for SNORD84 Gene

Subcategory (RNA class) for SNORD84 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for SNORD84 Gene

  • Small Nucleolar RNA, C/D Box 84 2 3 5
  • U84 3

External Ids for SNORD84 Gene

Previous GeneCards Identifiers for SNORD84 Gene

  • GC06U900829
  • GC06M031623
  • GC06M031625
  • GC06M031497
  • GC06M031508
  • GC06M031544
  • GC06M031570
  • GC06M031589
  • GC06M031755

Summaries for SNORD84 Gene

GeneCards Summary for SNORD84 Gene

SNORD84 (Small Nucleolar RNA, C/D Box 84) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD84 Gene

Genomics for SNORD84 Gene

Regulatory Elements for SNORD84 Gene

Enhancers for SNORD84 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F031538 1.2 ENCODE 0.8 +0.0 40 4.9 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF263 MCM3 SP3 TBX21 DDX39B LY6G5B ATF6B DHX16 PPP1R10 LSM2 SKIV2L RPL3P2 TCF19 ABCF1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD84 on UCSC Golden Path with GeneCards custom track

Promoters for SNORD84 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000487856 -722 2601 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF263 MCM3 SP3 TBX21

Genomic Location for SNORD84 Gene

31,541,101 bp from pter
31,541,178 bp from pter
78 bases
Minus strand

Genomic View for SNORD84 Gene

Genes around SNORD84 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD84 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD84 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for SNORD84 Gene

Post-translational modifications for SNORD84 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD84 Gene

Domains & Families for SNORD84 Gene

Gene Families for SNORD84 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD84: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD84 Gene

Function for SNORD84 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD84 Gene

Localization for SNORD84 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD84 Gene

Pathways & Interactions for SNORD84 Gene

SuperPathways for SNORD84 Gene

No Data Available

Interacting Proteins for SNORD84 Gene

Gene Ontology (GO) - Biological Process for SNORD84 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD84 Gene

Transcripts for SNORD84 Gene

mRNA/cDNA for SNORD84 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD84 Gene

No ASD Table

Relevant External Links for SNORD84 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD84 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORD84 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD84 Gene:

genes like me logo Genes that share expression patterns with SNORD84: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD84 Gene

Orthologs for SNORD84 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD84 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD83 35
  • 100 (a)
(Bos Taurus)
Mammalia SNORD83 35
  • 87 (a)
(Mus musculus)
Mammalia Gm22589 35
  • 86 (a)
(Canis familiaris)
Mammalia SNORD83 35
  • 83 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD83 35
  • 80 (a)
(Monodelphis domestica)
Mammalia SNORD83 35
  • 79 (a)
(Gallus gallus)
Aves SNORD83 35
  • 70 (a)
(Anolis carolinensis)
Reptilia SNORD83 35
  • 63 (a)
(Danio rerio)
Actinopterygii SNORD83 35
  • 70 (a)
sea squirt
(Ciona savignyi)
Ascidiacea SNORD83 35 35
  • 75 (a)
Species where no ortholog for SNORD84 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD84 Gene

Gene Tree for SNORD84 (if available)
Gene Tree for SNORD84 (if available)

Paralogs for SNORD84 Gene

No data available for Paralogs for SNORD84 Gene

Variants for SNORD84 Gene

Sequence variations from dbSNP and Humsavar for SNORD84 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs111541554 -- 31,540,727(+) TTTTC(C/G)ATCCC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113015863 -- 31,541,959(+) ACAGG(A/G)AGAGC nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs113045665 -- 31,540,708(-) GAGGT(C/G)GTGAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113899279 -- 31,542,488(+) GCTCG(G/T)GGGTG intron-variant, upstream-variant-2KB
rs11444847 -- 31,541,084(+) GTTAT(-/G)GGATG intron-variant, downstream-variant-500B, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD84 Gene

Variant ID Type Subtype PubMed ID
nsv1126749 CNV deletion 24896259
nsv470809 CNV loss 18288195
nsv830627 CNV loss 17160897
nsv1112900 CNV deletion 24896259
nsv1073969 CNV deletion 25765185
esv2759414 CNV gain+loss 17122850
dgv10404n54 CNV loss 21841781
dgv10403n54 CNV loss 21841781

Relevant External Links for SNORD84 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD84 Gene

Disorders for SNORD84 Gene

Relevant External Links for SNORD84

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD84 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD84 Gene

Publications for SNORD84 Gene

  1. Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2'-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs. (PMID: 10684929) JA!dy B.E. … Kiss T. (Nucleic Acids Res. 2000) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD84 Gene

Sources for SNORD84 Gene

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