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Aliases for SNORD80 Gene

Subcategory (RNA class) for SNORD80 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD80 Gene

  • Small Nucleolar RNA, C/D Box 80 2 3
  • RNA, U100 Small Nucleolar 2 3
  • RNU100 3
  • U80 3
  • Z15 3

External Ids for SNORD80 Gene

ORGUL Members for SNORD80 Gene

Previous HGNC Symbols for SNORD80 Gene

  • RNU100

Previous GeneCards Identifiers for SNORD80 Gene

  • GC01U901414
  • GC01M172152
  • GC01M172163
  • GC01M172176
  • GC01M173837
  • GC01M145058
  • GC01M173866
  • GC01M173876
  • GC01M173896
  • GC01M173909
  • GC01M173922

Summaries for SNORD80 Gene

GeneCards Summary for SNORD80 Gene

SNORD80 (Small Nucleolar RNA, C/D Box 80) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD80 Gene

Genomics for SNORD80 Gene

Regulatory Elements for SNORD80 Gene

Genomic Location for SNORD80 Gene

Chromosome:
1
Start:
173,864,833 bp from pter
End:
173,864,903 bp from pter
Size:
71 bases
Orientation:
Minus strand

Genomic View for SNORD80 Gene

Genes around SNORD80 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD80 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD80 Gene

Proteins for SNORD80 Gene

Post-translational modifications for SNORD80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD80 Gene

Domains & Families for SNORD80 Gene

Gene Families for SNORD80 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD80: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD80 Gene

Function for SNORD80 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD80 Gene

Localization for SNORD80 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD80 Gene

Pathways & Interactions for SNORD80 Gene

SuperPathways for SNORD80 Gene

No Data Available

Interacting Proteins for SNORD80 Gene

Gene Ontology (GO) - Biological Process for SNORD80 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD80 Gene

Drugs & Compounds for SNORD80 Gene

No Compound Related Data Available

Transcripts for SNORD80 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD80 Gene

No ASD Table

Relevant External Links for SNORD80 Gene

GeneLoc Exon Structure for
SNORD80
ECgene alternative splicing isoforms for
SNORD80

No data available for mRNA/cDNA for SNORD80 Gene

Expression for SNORD80 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD80 Gene

Orthologs for SNORD80 Gene

No data available for Orthologs and Evolution for SNORD80 Gene

Paralogs for SNORD80 Gene

No data available for Paralogs for SNORD80 Gene

Variants for SNORD80 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD80 Gene

Variant ID Type Subtype PubMed ID
nsv831926 CNV Gain+Loss 17160897
dgv149e1 CNV Complex 17122850

Relevant External Links for SNORD80 Gene

HapMap Linkage Disequilibrium report
SNORD80

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD80 Gene

Disorders for SNORD80 Gene

Relevant External Links for SNORD80

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD80

No disorders were found for SNORD80 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD80 Gene

Publications for SNORD80 Gene

  1. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski K.T. … Steitz J.A. (Curr. Biol. 2004) 2 3 67
  2. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD80 Gene

Sources for SNORD80 Gene

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