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Aliases for SNORD80 Gene

Subcategory (RNA class) for SNORD80 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD80 Gene

  • Small Nucleolar RNA, C/D Box 80 2 3
  • RNA, U100 Small Nucleolar 2 3
  • RNU100 3
  • U80 3
  • Z15 3

External Ids for SNORD80 Gene

ORGUL Members for SNORD80 Gene

Previous Symbols for SNORD80 Gene

  • RNU100

Summaries for SNORD80 Gene

GeneCards Summary for SNORD80 Gene

SNORD80 (Small Nucleolar RNA, C/D Box 80) is a RNA Gene, and belongs to snoRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD80 Gene

Genomics for SNORD80 Gene

Genomic Location for SNORD80 Gene

Start:
173,864,833 bp from pter
End:
173,864,903 bp from pter
Size:
71 bases
Orientation:
Minus strand

Genomic View for SNORD80 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD80 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD80 Gene

Regulatory Elements for SNORD80 Gene

Proteins for SNORD80 Gene

Post-translational modifications for SNORD80 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD80 Gene

Domains for SNORD80 Gene

Gene Families for SNORD80 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORD80: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORD80 Gene

Function for SNORD80 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD80 Gene

Localization for SNORD80 Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORD80 Gene

Pathways for SNORD80 Gene

SuperPathways for SNORD80 Gene

No Data Available

Interacting Proteins for SNORD80 Gene

Gene Ontology (GO) - Biological Process for SNORD80 Gene

None

No data available for Pathways by source for SNORD80 Gene

Transcripts for SNORD80 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD80 Gene

No ASD Table

Relevant External Links for SNORD80 Gene

GeneLoc Exon Structure for
SNORD80
ECgene alternative splicing isoforms for
SNORD80

No data available for mRNA/cDNA for SNORD80 Gene

Expression for SNORD80 Gene

No Expression Related Data Available

Orthologs for SNORD80 Gene

No data available for Orthologs and Evolution for SNORD80 Gene

Paralogs for SNORD80 Gene

No data available for Paralogs for SNORD80 Gene

Variants for SNORD80 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD80 Gene

Variant ID Type Subtype PubMed ID
nsv831926 CNV Gain+Loss 17160897
dgv149e1 CNV Complex 17122850

Relevant External Links for SNORD80 Gene

HapMap Linkage Disequilibrium report
SNORD80

No data available for Sequence variations from dbSNP and Humsavar for SNORD80 Gene

Disorders for SNORD80 Gene

No disorders were found for SNORD80 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD80 Gene

Publications for SNORD80 Gene

  1. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 2 3
  2. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski K.T. … Steitz J.A. (Curr. Biol. 2004) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD80 Gene

Sources for SNORD80 Gene

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