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Aliases for SNORD77 Gene

Subcategory (RNA class) for SNORD77 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD77 Gene

  • Small Nucleolar RNA, C/D Box 77 2 3
  • SNORD77A 3
  • U77 3

External Ids for SNORD77 Gene

ORGUL Members for SNORD77 Gene

Previous GeneCards Identifiers for SNORD77 Gene

  • GC01U901238
  • GC01M172149
  • GC01M172160
  • GC01M172173
  • GC01M173844
  • GC01M173851
  • GC01M173856
  • GC01M173865
  • GC01M173875
  • GC01M173884
  • GC01M173893
  • GC01M173895
  • GC01M173908
  • GC01M173921
  • GC01M173927
  • GC01M173952
  • GC01M173965

Summaries for SNORD77 Gene

GeneCards Summary for SNORD77 Gene

SNORD77 (Small Nucleolar RNA, C/D Box 77) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD77 Gene

Genomics for SNORD77 Gene

Regulatory Elements for SNORD77 Gene


Genomic Location for SNORD77 Gene

Chromosome:
1
Start:
173,866,311 bp from pter
End:
173,866,371 bp from pter
Size:
61 bases
Orientation:
Minus strand

Genomic View for SNORD77 Gene

Genes around SNORD77 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD77 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD77 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD77 Gene

Proteins for SNORD77 Gene

Post-translational modifications for SNORD77 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD77 Gene

Domains & Families for SNORD77 Gene

Gene Families for SNORD77 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD77: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD77 Gene

Function for SNORD77 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD77 Gene

Localization for SNORD77 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD77 Gene

Pathways & Interactions for SNORD77 Gene

SuperPathways for SNORD77 Gene

No Data Available

Interacting Proteins for SNORD77 Gene

Gene Ontology (GO) - Biological Process for SNORD77 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD77 Gene

Drugs & Compounds for SNORD77 Gene

No Compound Related Data Available

Transcripts for SNORD77 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD77 Gene

No ASD Table

Relevant External Links for SNORD77 Gene

GeneLoc Exon Structure for
SNORD77
ECgene alternative splicing isoforms for
SNORD77

No data available for mRNA/cDNA for SNORD77 Gene

Expression for SNORD77 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD77 Gene:

SNORD77
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD77 Gene

Orthologs for SNORD77 Gene

No data available for Orthologs and Evolution for SNORD77 Gene

Paralogs for SNORD77 Gene

No data available for Paralogs for SNORD77 Gene

Variants for SNORD77 Gene

Sequence variations from dbSNP and Humsavar for SNORD77 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000056001 -- 173,867,389(+) CGCGC(A/G)CCTGT intron-variant, upstream-variant-2KB
rs1000127752 -- 173,867,669(+) TCGGC(A/G)TGTGC intron-variant, upstream-variant-2KB
rs1000500475 -- 173,868,214(+) CCTCC(G/T)CCCGA upstream-variant-2KB, utr-variant-5-prime
rs1000607514 -- 173,867,847(+) TTGTA(A/G)GCCCT intron-variant, upstream-variant-2KB
rs1000640330 -- 173,867,622(+) GATGG(A/G)GGCTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD77 Gene

Variant ID Type Subtype PubMed ID
esv2758978 CNV loss 17122850
nsv831926 CNV gain+loss 17160897

Relevant External Links for SNORD77 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD77

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD77 Gene

Disorders for SNORD77 Gene

Relevant External Links for SNORD77

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD77

No disorders were found for SNORD77 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD77 Gene

Publications for SNORD77 Gene

  1. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski K.T. … Steitz J.A. (Curr. Biol. 2004) 2 3 64
  2. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 2 3 64
  3. An updated human snoRNAome. (PMID: 27174936) Jorjani H. … Gruber A.R. (Nucleic Acids Res. 2016) 3 64
  4. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD77 Gene

Sources for SNORD77 Gene

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