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Aliases for SNORD76 Gene

Subcategory (RNA class) for SNORD76 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD76 Gene

  • Small Nucleolar RNA, C/D Box 76 2 3
  • U76 3

External Ids for SNORD76 Gene

ORGUL Members for SNORD76 Gene

Previous GeneCards Identifiers for SNORD76 Gene

  • GC01U901237
  • GC01M172154
  • GC01M172165
  • GC01M172177
  • GC01M173840
  • GC01M173847
  • GC01M173854
  • GC01M173858
  • GC01M173868
  • GC01M173878
  • GC01M173887
  • GC01M173899
  • GC01M173911
  • GC01M173924
  • GC01M173949
  • GC01M173963

Summaries for SNORD76 Gene

GeneCards Summary for SNORD76 Gene

SNORD76 (Small Nucleolar RNA, C/D Box 76) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD76 Gene

Genomics for SNORD76 Gene

Regulatory Elements for SNORD76 Gene

Enhancers for SNORD76 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F173861 0.2 ENCODE 0.8 0.0 -45 10.3 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF263 SP3 TBX21 DARS2 GAS5-AS1 KLHL20 ANKRD45 GAS5 LOC730159 RC3H1 CENPL RNA5SP67 SERPINC1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORD76 on UCSC Golden Path with GeneCards custom track

Promoters for SNORD76 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000547888 -885 4001 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1

Genomic Location for SNORD76 Gene

Chromosome:
1
Start:
173,866,635 bp from pter
End:
173,866,715 bp from pter
Size:
81 bases
Orientation:
Minus strand

Genomic View for SNORD76 Gene

Genes around SNORD76 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD76 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD76 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD76 Gene

Proteins for SNORD76 Gene

Post-translational modifications for SNORD76 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD76 Gene

Domains & Families for SNORD76 Gene

Gene Families for SNORD76 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD76: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD76 Gene

Function for SNORD76 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD76 Gene

Localization for SNORD76 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD76 Gene

Pathways & Interactions for SNORD76 Gene

SuperPathways for SNORD76 Gene

No Data Available

Interacting Proteins for SNORD76 Gene

Gene Ontology (GO) - Biological Process for SNORD76 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD76 Gene

Transcripts for SNORD76 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD76 Gene

No ASD Table

Relevant External Links for SNORD76 Gene

GeneLoc Exon Structure for
SNORD76
ECgene alternative splicing isoforms for
SNORD76

No data available for mRNA/cDNA for SNORD76 Gene

Expression for SNORD76 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD76 Gene:

SNORD76
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD76 Gene

Orthologs for SNORD76 Gene

No data available for Orthologs and Evolution for SNORD76 Gene

Paralogs for SNORD76 Gene

No data available for Paralogs for SNORD76 Gene

Variants for SNORD76 Gene

Sequence variations from dbSNP and Humsavar for SNORD76 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs112023202 -- 173,866,568(+) AGGAC(C/G/T)TGGGA downstream-variant-500B, upstream-variant-2KB, splice-acceptor-variant
rs112154254 -- 173,867,978(+) ACTCC(C/T)ACCTC nc-transcript-variant, upstream-variant-2KB
rs112279140 -- 173,866,758(+) CAACT(G/T)ACTTC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs112727149 -- 173,866,800(+) AACTA(G/T)AAAAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs112986720 -- 173,868,285(+) GAAGG(G/T)GGGGC intron-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for SNORD76 Gene

Variant ID Type Subtype PubMed ID
esv2758978 CNV loss 17122850
nsv831926 CNV gain+loss 17160897

Relevant External Links for SNORD76 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD76

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD76 Gene

Disorders for SNORD76 Gene

Relevant External Links for SNORD76

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD76

No disorders were found for SNORD76 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD76 Gene

Publications for SNORD76 Gene

  1. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski K.T. … Steitz J.A. (Curr. Biol. 2004) 2 3 64
  2. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 2 3 64
  3. SNORD76, a box C/D snoRNA, acts as a tumor suppressor in glioblastoma. (PMID: 25715874) Chen L. … Kang C. (Sci Rep 2015) 3 64
  4. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 64
  5. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD76 Gene

Sources for SNORD76 Gene

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