Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORD75 Gene

Subcategory (RNA class) for SNORD75 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD75 Gene

  • Small Nucleolar RNA, C/D Box 75 2 3
  • U75 3

External Ids for SNORD75 Gene

ORGUL Members for SNORD75 Gene

Previous GeneCards Identifiers for SNORD75 Gene

  • GC01U901236
  • GC01M172155
  • GC01M172167
  • GC01M172178
  • GC01M173841
  • GC01M173848
  • GC01M145060
  • GC01M173859
  • GC01M173869
  • GC01M173879
  • GC01M173888
  • GC01M173902
  • GC01M173915
  • GC01M173935
  • GC01M173945
  • GC01M173959
  • GC01M173975
  • GC01M173983
  • GC01M173987

Summaries for SNORD75 Gene

GeneCards Summary for SNORD75 Gene

SNORD75 (Small Nucleolar RNA, C/D Box 75) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD75 Gene

Genomics for SNORD75 Gene

Regulatory Elements for SNORD75 Gene

Enhancers for SNORD75 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G173861 1.2 ENCODE 0.7 +0.2 179 10.3 MLX CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 DARS2 ANKRD45 GAS5 RC3H1 CENPL RNA5SP67 SERPINC1 KLHL20 GAS5-AS1 RABGAP1L
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD75 on UCSC Golden Path with GeneCards custom track

Promoters for SNORD75 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000015994 -962 3001 MLX CREB3L1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3

Genomic Location for SNORD75 Gene

Chromosome:
1
Start:
173,866,879 bp from pter
End:
173,866,938 bp from pter
Size:
60 bases
Orientation:
Minus strand

Genomic View for SNORD75 Gene

Genes around SNORD75 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD75 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD75 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD75 Gene

Proteins for SNORD75 Gene

Post-translational modifications for SNORD75 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD75 Gene

Domains & Families for SNORD75 Gene

Gene Families for SNORD75 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD75: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD75 Gene

Function for SNORD75 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD75 Gene

Localization for SNORD75 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD75 Gene

Pathways & Interactions for SNORD75 Gene

SuperPathways for SNORD75 Gene

No Data Available

Interacting Proteins for SNORD75 Gene

Gene Ontology (GO) - Biological Process for SNORD75 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD75 Gene

Drugs & Compounds for SNORD75 Gene

No Compound Related Data Available

Transcripts for SNORD75 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD75 Gene

No ASD Table

Relevant External Links for SNORD75 Gene

GeneLoc Exon Structure for
SNORD75
ECgene alternative splicing isoforms for
SNORD75

No data available for mRNA/cDNA for SNORD75 Gene

Expression for SNORD75 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD75 Gene:

SNORD75
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD75 Gene

Orthologs for SNORD75 Gene

No data available for Orthologs and Evolution for SNORD75 Gene

Paralogs for SNORD75 Gene

No data available for Paralogs for SNORD75 Gene

Variants for SNORD75 Gene

Sequence variations from dbSNP and Humsavar for SNORD75 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000056001 -- 173,867,389(+) CGCGC(A/G)CCTGT intron-variant, upstream-variant-2KB
rs1000127752 -- 173,867,669(+) TCGGC(A/G)TGTGC intron-variant, upstream-variant-2KB
rs1000247329 -- 173,868,599(+) GCCCC(C/T)TCGCG intron-variant, upstream-variant-2KB
rs1000450082 -- 173,868,415(+) GTGCT(A/G)CTCCT intron-variant, upstream-variant-2KB
rs1000500475 -- 173,868,214(+) CCTCC(G/T)CCCGA upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for SNORD75 Gene

Variant ID Type Subtype PubMed ID
esv2758978 CNV loss 17122850
nsv831926 CNV gain+loss 17160897

Relevant External Links for SNORD75 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD75

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD75 Gene

Disorders for SNORD75 Gene

Relevant External Links for SNORD75

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD75

No disorders were found for SNORD75 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD75 Gene

Publications for SNORD75 Gene

  1. Guide RNAs with 5' caps and novel box C/D snoRNA-like domains for modification of snRNAs in metazoa. (PMID: 15556860) Tycowski K.T. … Steitz J.A. (Curr. Biol. 2004) 2 3 64
  2. Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes. (PMID: 9819378) Smith C.M. … Steitz J.A. (Mol. Cell. Biol. 1998) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD75 Gene

Sources for SNORD75 Gene

Content
Loading form....