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Aliases for SNORD73B Gene

Aliases for SNORD73B Gene

  • Small Nucleolar RNA, C/D Box U73B (Pseudogene) 2 3 5
  • RNA, U73B Small Nucleolar Pseudogene 2 3
  • U73B Small Nucleolar RNA 3
  • U73B SnoRNA 3
  • RNU73B 3
  • U73B 3

External Ids for SNORD73B Gene

Previous HGNC Symbols for SNORD73B Gene

  • RNU73B

Previous GeneCards Identifiers for SNORD73B Gene

  • GC04P152242
  • GC04P152024
  • GC04P152028
  • GC04P152038

Summaries for SNORD73B Gene

GeneCards Summary for SNORD73B Gene

SNORD73B (Small Nucleolar RNA, C/D Box U73B (Pseudogene)) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD73B Gene

Genomics for SNORD73B Gene

Regulatory Elements for SNORD73B Gene

Enhancers for SNORD73B Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F151125 0.7 FANTOM5 12 +24.1 24147 0.3 SNORD73A SNORD73B RPS3A ENSG00000270681
GH04F151126 0.3 FANTOM5 12 +25.2 25165 0.3 SNORD73A SNORD73B ENSG00000270681 LRBA
GH04F151029 0.9 ENCODE 11.9 -71.9 -71929 0.8 BCOR BMI1 ZNF316 POLR2A FOXK2 CBX5 EED NFE2 TRIM24 CREM RPS3A SNORD73B AK4P6 GC04M151092
GH04F151097 0.8 ENCODE 0.8 -1.9 -1907 4.5 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 RPS3A ENSG00000249708 ENSG00000249818 FAM160A1 SH3D19 ENSG00000270681 GC04P151100 GC04P151105 GC04P151106 SNORD73B
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORD73B on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD73B Gene

Chromosome:
4
Start:
151,101,957 bp from pter
End:
151,102,231 bp from pter
Size:
275 bases
Orientation:
Plus strand

Genomic View for SNORD73B Gene

Genes around SNORD73B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD73B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD73B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD73B Gene

Proteins for SNORD73B Gene

Post-translational modifications for SNORD73B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD73B Gene

Domains & Families for SNORD73B Gene

Gene Families for SNORD73B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD73B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD73B Gene

Function for SNORD73B Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD73B Gene

Localization for SNORD73B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD73B Gene

Pathways & Interactions for SNORD73B Gene

SuperPathways for SNORD73B Gene

No Data Available

Interacting Proteins for SNORD73B Gene

Gene Ontology (GO) - Biological Process for SNORD73B Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD73B Gene

Transcripts for SNORD73B Gene

mRNA/cDNA for SNORD73B Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD73B Gene

No ASD Table

Relevant External Links for SNORD73B Gene

GeneLoc Exon Structure for
SNORD73B
ECgene alternative splicing isoforms for
SNORD73B

Expression for SNORD73B Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for SNORD73B Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD73B Gene:

SNORD73B
genes like me logo Genes that share expression patterns with SNORD73B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD73B Gene

Orthologs for SNORD73B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD73B Gene

Organism Taxonomy Gene Similarity Type Details
oppossum
(Monodelphis domestica)
Mammalia SNORD73 35
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD73 35
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Rnu73b 35
  • 85 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD73 35
  • 77 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD73 35
  • 79 (a)
OneToMany
Species where no ortholog for SNORD73B was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD73B Gene

ENSEMBL:
Gene Tree for SNORD73B (if available)
TreeFam:
Gene Tree for SNORD73B (if available)

Paralogs for SNORD73B Gene

No data available for Paralogs for SNORD73B Gene

Variants for SNORD73B Gene

Relevant External Links for SNORD73B Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD73B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD73B Gene

Disorders for SNORD73B Gene

No disorders were found for SNORD73B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for SNORD73B Gene

Publications for SNORD73B Gene

  1. A novel snoRNA (U73) is encoded within the introns of the human and mouse ribosomal protein S3a genes. (PMID: 9573378) Rebane A. … Metspalu A. (Gene 1998) 2 3 64
  2. The human S3a ribosomal protein: sequence, location and cell-free transcription of the functional gene. (PMID: 8647443) Nolte D. … Seifart K.H. (Gene 1996) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD73B Gene

Sources for SNORD73B Gene

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