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Aliases for SNORD68 Gene

Subcategory (RNA class) for SNORD68 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD68 Gene

  • Small Nucleolar RNA, C/D Box 68 2 3
  • HBII-202 Small Nucleolar RNA 3
  • HBII-202 SnoRNA 3
  • HBII-202 3

External Ids for SNORD68 Gene

ORGUL Members for SNORD68 Gene

Previous GeneCards Identifiers for SNORD68 Gene

  • GC16P088157
  • GC16P089629
  • GC16P075323
  • GC16P089632
  • GC16P089636
  • GC16P089649
  • GC16P089658
  • GC16P089668

Summaries for SNORD68 Gene

GeneCards Summary for SNORD68 Gene

SNORD68 (Small Nucleolar RNA, C/D Box 68) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD68 Gene

Genomics for SNORD68 Gene

Regulatory Elements for SNORD68 Gene

Genomic Location for SNORD68 Gene

Start:
89,561,430 bp from pter
End:
89,561,517 bp from pter
Size:
88 bases
Orientation:
Plus strand

Genomic View for SNORD68 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD68 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD68 Gene

Proteins for SNORD68 Gene

Post-translational modifications for SNORD68 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD68 Gene

Domains for SNORD68 Gene

Gene Families for SNORD68 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD68: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD68 Gene

Function for SNORD68 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD68 Gene

Localization for SNORD68 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD68 Gene

Pathways for SNORD68 Gene

genes like me logo Genes that share pathways with SNORD68: view

Pathways by source for SNORD68 Gene

1 BioSystems pathway for SNORD68 Gene

Interacting Proteins for SNORD68 Gene

Gene Ontology (GO) - Biological Process for SNORD68 Gene

None

Compounds for SNORD68 Gene

(2) PharmGKB related drug/compound annotations for SNORD68 Gene

Drug/compound Annotation
docetaxel CA
thalidomide CA
genes like me logo Genes that share compounds with SNORD68: view

Transcripts for SNORD68 Gene

mRNA/cDNA for SNORD68 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD68 Gene

No ASD Table

Relevant External Links for SNORD68 Gene

GeneLoc Exon Structure for
SNORD68
ECgene alternative splicing isoforms for
SNORD68

Expression for SNORD68 Gene

mRNA expression in normal human tissues for SNORD68 Gene

genes like me logo Genes that share expressions with SNORD68: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD68 Gene

Orthologs for SNORD68 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD68 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia snoMBII-202 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia snoMBII-202 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia snoMBII-202 36
  • 80 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord68 16
Snord68 36
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia snoMBII-202 36
  • 81 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia snoMBII-202 36
  • 80 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii snoMBII-202 36
  • 73 (a)
OneToOne
Species with no ortholog for SNORD68:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD68 Gene

ENSEMBL:
Gene Tree for SNORD68 (if available)
TreeFam:
Gene Tree for SNORD68 (if available)

Paralogs for SNORD68 Gene

No data available for Paralogs for SNORD68 Gene

Variants for SNORD68 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD68 Gene

Variant ID Type Subtype PubMed ID
nsv907357 CNV Loss 21882294
nsv428331 CNV Gain+Loss 18775914
dgv922e1 CNV Complex 17122850
nsv471118 CNV Gain 18288195
nsv907405 CNV Loss 21882294
dgv3008n71 CNV Loss 21882294
dgv3009n71 CNV Loss 21882294
nsv509639 CNV Insertion 20534489
dgv3010n71 CNV Loss 21882294
dgv3011n71 CNV Loss 21882294

Relevant External Links for SNORD68 Gene

HapMap Linkage Disequilibrium report
SNORD68

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD68 Gene

Disorders for SNORD68 Gene

No disorders were found for SNORD68 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD68 Gene

Publications for SNORD68 Gene

  1. The numerous modified nucleotides in eukaryotic ribosomal RNA. (PMID: 2247610) Maden B.E. (Prog. Nucleic Acid Res. Mol. Biol. 1990) 2 3
  2. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD68 Gene

Sources for SNORD68 Gene

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