Free for academic non-profit institutions. Other users need a Commercial license

Aliases for SNORD67 Gene

Subcategory (RNA class) for SNORD67 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD67 Gene

  • Small Nucleolar RNA, C/D Box 67 2 3 5
  • HBII-166 3

External Ids for SNORD67 Gene

ORGUL Members for SNORD67 Gene

Previous GeneCards Identifiers for SNORD67 Gene

  • GC11U900714
  • GC11M046740
  • GC11M046489
  • GC11M046783
  • GC11M047084
  • GC11M047929
  • GC11M050783
  • GC11M051578
  • GC11M052240
  • GC11M052900

Summaries for SNORD67 Gene

GeneCards Summary for SNORD67 Gene

SNORD67 (Small Nucleolar RNA, C/D Box 67) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD67 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD67 Gene

Genomics for SNORD67 Gene

Regulatory Elements for SNORD67 Gene

Enhancers for SNORD67 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H046344 1.5 Ensembl ENCODE dbSUPER 14.6 +412.6 412594 10 HDGF ARNT ZNF133 SIN3A ZNF2 YY1 GLIS2 ZNF143 ATF7 RUNX3 C11orf49 LOC105376662 LOC101928894 SNORD67 ENSG00000255447 ENSG00000254514 MDK CHRM4 CREB3L1 LINC02489
GH11H046699 1.4 ENCODE dbSUPER 14.8 +61.6 61628 2 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 AMBRA1 KBTBD4 ZNF408 SNORD67 LOC105376662 LOC101928894 ENSG00000255447 ARHGAP1 C1QTNF4 ENSG00000270060
GH11H047213 1.4 ENCODE dbSUPER 14.6 -452.8 -452842 3 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 ZNF143 FOS LRP4 PACSIN3 SNORD67 LOC100287189 LOC105376662 C11orf49 ATG13 DDB2 ENSG00000256897
GH11H047577 1.2 ENCODE 14.6 -816.4 -816367 3 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A NUP160 FNBP4 ENSG00000200090 ENSG00000270060 DDB2 AMBRA1 C1QTNF4 ZNF408 LOC100287189 SNORD67
GH11H046647 1.2 Ensembl ENCODE dbSUPER 10.4 +113.3 113263 2 NFIA JUN RAD21 ATF2 NR2F2 JUND POLR2A ZBTB48 ZNF629 HNF4A ATG13 ZNF408 ARHGAP1 HARBI1 F2 AMBRA1 CHRM4 SNORD67 CKAP5 LRP4
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD67 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD67 Gene

Chromosome:
11
Start:
46,762,389 bp from pter
End:
46,762,499 bp from pter
Size:
111 bases
Orientation:
Minus strand

Genomic View for SNORD67 Gene

Genes around SNORD67 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD67 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD67 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD67 Gene

Proteins for SNORD67 Gene

Post-translational modifications for SNORD67 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD67 Gene

Domains & Families for SNORD67 Gene

Gene Families for SNORD67 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD67: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD67 Gene

Function for SNORD67 Gene

Phenotypes From GWAS Catalog for SNORD67 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD67
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD67 Gene

Localization for SNORD67 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD67 Gene

Pathways & Interactions for SNORD67 Gene

SuperPathways for SNORD67 Gene

No Data Available

Interacting Proteins for SNORD67 Gene

Gene Ontology (GO) - Biological Process for SNORD67 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD67 Gene

Drugs & Compounds for SNORD67 Gene

No Compound Related Data Available

Transcripts for SNORD67 Gene

mRNA/cDNA for SNORD67 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD67
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD67 Gene

No ASD Table

Relevant External Links for SNORD67 Gene

GeneLoc Exon Structure for
SNORD67
ECgene alternative splicing isoforms for
SNORD67

Expression for SNORD67 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD67 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD67 Gene:

SNORD67

SOURCE GeneReport for Unigene cluster for SNORD67 Gene:

Hs.693252
genes like me logo Genes that share expression patterns with SNORD67: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD67 Gene

Orthologs for SNORD67 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD67 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD67 34
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD67 34
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord67 34
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD67 34
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD67 34
  • 85 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea SNORD67 34 34
  • 67 (a)
ManyToMany
Species where no ortholog for SNORD67 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD67 Gene

ENSEMBL:
Gene Tree for SNORD67 (if available)
TreeFam:
Gene Tree for SNORD67 (if available)

Paralogs for SNORD67 Gene

No data available for Paralogs for SNORD67 Gene

Variants for SNORD67 Gene

Sequence variations from dbSNP and Humsavar for SNORD67 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000248233 -- 46,762,840(+) GTTTT(G/T)AAAGA intron-variant, upstream-variant-2KB
rs1002693630 -- 46,763,962(+) CCCCA(A/G)GTAGC intron-variant, upstream-variant-2KB
rs1003667967 -- 46,764,307(+) TACAA(A/C)GACCT intron-variant, upstream-variant-2KB
rs1007326831 -- 46,761,988(+) TCAGA(G/T)AAGTC intron-variant, downstream-variant-500B
rs1007560549 -- 46,763,090(+) AGGAC(A/G)CTTGT upstream-variant-2KB, reference, synonymous-codon

Relevant External Links for SNORD67 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD67

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD67 Gene

Disorders for SNORD67 Gene

Relevant External Links for SNORD67

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD67

No disorders were found for SNORD67 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD67 Gene

Publications for SNORD67 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) Hüttenhofer A … Brosius J (The EMBO journal 2001) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60

Products for SNORD67 Gene

Sources for SNORD67 Gene

Content
Loading form....