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Aliases for SNORD67 Gene

Subcategory (RNA class) for SNORD67 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD67 Gene

  • Small Nucleolar RNA, C/D Box 67 2 3 5
  • HBII-166 3

External Ids for SNORD67 Gene

ORGUL Members for SNORD67 Gene

Previous GeneCards Identifiers for SNORD67 Gene

  • GC11U900714
  • GC11M046740
  • GC11M046489
  • GC11M046783
  • GC11M047084
  • GC11M047929
  • GC11M050783
  • GC11M051578

Summaries for SNORD67 Gene

GeneCards Summary for SNORD67 Gene

SNORD67 (Small Nucleolar RNA, C/D Box 67) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD67 Gene

Genomics for SNORD67 Gene

Regulatory Elements for SNORD67 Gene

Enhancers for SNORD67 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F046699 0.2 ENCODE 16.3 +61.6 61628 2.5 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 SNORD67 LOC105376662 LOC101928894 LOC105376659 ARHGAP1 KBTBD4 RPS10P19 LOC100507384 PACSIN3 MDK
GH11F046344 1 Ensembl ENCODE 16.2 +412.6 412594 10.4 HDGF CREB3L1 ZNF133 ARID4B SIN3A ZNF2 GLIS2 ZNF143 KLF13 ZNF263 C11orf49 LOC105376662 LOC101928894 SNORD67 LOC105376659 ENSG00000254514 MDK CHRM4 CREB3L1 LOC101928919
GH11F047193 1 Ensembl ENCODE 16.2 -431.7 -431707 2.2 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 FOS SNORD67 LOC100287189 LOC105376662 RPS20P26 GC11P047205
GH11F047213 0.6 ENCODE 16.2 -452.8 -452842 3.7 HDGF PKNOX1 CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 YY1 FOS LRP4 SNORD67 LOC100287189 LOC105376662 PACSIN3 C11orf49 ATG13 DDB2 ENSG00000256897
GH11F047577 0.6 ENCODE 16.2 -816.4 -816367 3.1 CREB3L1 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC NUP160 ENSG00000200090 FNBP4 LOC100287189 SNORD67 C11orf49 ENSG00000270060 DDB2 C1QTNF4 ENSG00000231880
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORD67 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD67 Gene

Chromosome:
11
Start:
46,762,389 bp from pter
End:
46,762,499 bp from pter
Size:
111 bases
Orientation:
Minus strand

Genomic View for SNORD67 Gene

Genes around SNORD67 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD67 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD67 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD67 Gene

Proteins for SNORD67 Gene

Post-translational modifications for SNORD67 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD67 Gene

Domains & Families for SNORD67 Gene

Gene Families for SNORD67 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD67: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD67 Gene

Function for SNORD67 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD67 Gene

Localization for SNORD67 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD67 Gene

Pathways & Interactions for SNORD67 Gene

SuperPathways for SNORD67 Gene

No Data Available

Interacting Proteins for SNORD67 Gene

Gene Ontology (GO) - Biological Process for SNORD67 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD67 Gene

Transcripts for SNORD67 Gene

mRNA/cDNA for SNORD67 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD67 Gene

No ASD Table

Relevant External Links for SNORD67 Gene

GeneLoc Exon Structure for
SNORD67
ECgene alternative splicing isoforms for
SNORD67

Expression for SNORD67 Gene

mRNA expression in normal human tissues for SNORD67 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD67 Gene:

SNORD67

SOURCE GeneReport for Unigene cluster for SNORD67 Gene:

Hs.693252
genes like me logo Genes that share expression patterns with SNORD67: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD67 Gene

Orthologs for SNORD67 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD67 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD67 35
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD67 35
  • 97 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord67 35
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD67 35
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD67 35
  • 85 (a)
OneToOne
sea squirt
(Ciona savignyi)
Ascidiacea SNORD67 35 35
  • 67 (a)
ManyToMany
Species where no ortholog for SNORD67 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD67 Gene

ENSEMBL:
Gene Tree for SNORD67 (if available)
TreeFam:
Gene Tree for SNORD67 (if available)

Paralogs for SNORD67 Gene

No data available for Paralogs for SNORD67 Gene

Variants for SNORD67 Gene

Sequence variations from dbSNP and Humsavar for SNORD67 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs111303622 -- 46,763,015(+) TCATT(C/T)TCAGT upstream-variant-2KB, reference, synonymous-codon
rs111566470 -- 46,763,247(+) GCAAG(C/T)GTCTT intron-variant, upstream-variant-2KB
rs112099505 -- 46,763,024(+) GTAAG(A/G)TGATA upstream-variant-2KB, reference, synonymous-codon
rs112376106 -- 46,764,155(+) TAAAG(-/A)AAAAA intron-variant, upstream-variant-2KB
rs112507008 -- 46,762,898(+) AAAAA(G/T)GGAGA intron-variant, upstream-variant-2KB

Relevant External Links for SNORD67 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD67

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD67 Gene

Disorders for SNORD67 Gene

Relevant External Links for SNORD67

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD67

No disorders were found for SNORD67 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD67 Gene

Publications for SNORD67 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD67 Gene

Sources for SNORD67 Gene

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