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Aliases for SNORD65 Gene

Subcategory (RNA class) for SNORD65 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD65 Gene

  • Small Nucleolar RNA, C/D Box 65 2 3
  • HBII-135 3

External Ids for SNORD65 Gene

ORGUL Members for SNORD65 Gene

Previous GeneCards Identifiers for SNORD65 Gene

  • GC17U900621
  • GC17P016294
  • GC17P016299
  • GC17P016344

Summaries for SNORD65 Gene

GeneCards Summary for SNORD65 Gene

SNORD65 (Small Nucleolar RNA, C/D Box 65) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD65 Gene

Genomics for SNORD65 Gene

Regulatory Elements for SNORD65 Gene

Genomic Location for SNORD65 Gene

Start:
16,441,226 bp from pter
End:
16,441,298 bp from pter
Size:
73 bases
Orientation:
Plus strand

Genomic View for SNORD65 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD65 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD65 Gene

Proteins for SNORD65 Gene

Post-translational modifications for SNORD65 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD65 Gene

Domains for SNORD65 Gene

Gene Families for SNORD65 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD65: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD65 Gene

Function for SNORD65 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD65 Gene

Localization for SNORD65 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD65 Gene

Pathways for SNORD65 Gene

SuperPathways for SNORD65 Gene

No Data Available

Interacting Proteins for SNORD65 Gene

Gene Ontology (GO) - Biological Process for SNORD65 Gene

None

No data available for Pathways by source for SNORD65 Gene

Transcripts for SNORD65 Gene

mRNA/cDNA for SNORD65 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD65 Gene

No ASD Table

Relevant External Links for SNORD65 Gene

GeneLoc Exon Structure for
SNORD65
ECgene alternative splicing isoforms for
SNORD65

Expression for SNORD65 Gene

No Expression Related Data Available

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD65 Gene

Orthologs for SNORD65 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SNORD65 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Snord65 16
Species with no ortholog for SNORD65:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD65 Gene

ENSEMBL:
Gene Tree for SNORD65 (if available)
TreeFam:
Gene Tree for SNORD65 (if available)

Paralogs for SNORD65 Gene

No data available for Paralogs for SNORD65 Gene

Variants for SNORD65 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD65 Gene

Variant ID Type Subtype PubMed ID
esv2715702 CNV Deletion 23290073

Relevant External Links for SNORD65 Gene

HapMap Linkage Disequilibrium report
SNORD65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD65 Gene

Disorders for SNORD65 Gene

No disorders were found for SNORD65 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD65 Gene

Publications for SNORD65 Gene

  1. RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse. (PMID: 11387227) HA1ttenhofer A. … Brosius J. (EMBO J. 2001) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD65 Gene

Sources for SNORD65 Gene

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