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Aliases for SNORD64 Gene

Subcategory (RNA class) for SNORD64 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD64 Gene

  • Small Nucleolar RNA, C/D Box 64 2 3 5
  • HBII-13 SnoRNA 3
  • HBII-13 3

External Ids for SNORD64 Gene

ORGUL Members for SNORD64 Gene

Previous GeneCards Identifiers for SNORD64 Gene

  • GC15P022803
  • GC15P022806
  • GC15P022809
  • GC15P025231
  • GC15P003366
  • GC15P025233
  • GC15P025236
  • GC15P025254
  • GC15P025005
  • GC15P025014
  • GC15P025025
  • GC15P025040
  • GC15P025105
  • GC15P025113

Summaries for SNORD64 Gene

Entrez Gene Summary for SNORD64 Gene

  • This gene encodes a C/D box-type small nucleolar RNA that is expressed predominantly in the brain. Expression of this RNA is not detectable in the brains of patients with Prader-Willi syndrome. [provided by RefSeq, Jun 2010]

GeneCards Summary for SNORD64 Gene

SNORD64 (Small Nucleolar RNA, C/D Box 64) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD64 include Prader-Willi Syndrome.

Additional gene information for SNORD64 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD64 Gene

Genomics for SNORD64 Gene

Regulatory Elements for SNORD64 Gene


Genomic Location for SNORD64 Gene

Chromosome:
15
Start:
24,985,100 bp from pter
End:
24,985,166 bp from pter
Size:
67 bases
Orientation:
Plus strand

Genomic View for SNORD64 Gene

Genes around SNORD64 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD64 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD64 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD64 Gene

Proteins for SNORD64 Gene

Post-translational modifications for SNORD64 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD64 Gene

Domains & Families for SNORD64 Gene

Gene Families for SNORD64 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD64: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD64 Gene

Function for SNORD64 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD64
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD64 Gene

Localization for SNORD64 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD64 Gene

Pathways & Interactions for SNORD64 Gene

SuperPathways for SNORD64 Gene

No Data Available

Interacting Proteins for SNORD64 Gene

Gene Ontology (GO) - Biological Process for SNORD64 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD64 Gene

Drugs & Compounds for SNORD64 Gene

No Compound Related Data Available

Transcripts for SNORD64 Gene

mRNA/cDNA for SNORD64 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for SNORD64
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD64 Gene

No ASD Table

Relevant External Links for SNORD64 Gene

GeneLoc Exon Structure for
SNORD64
ECgene alternative splicing isoforms for
SNORD64

Expression for SNORD64 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD64 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD64 Gene:

SNORD64
genes like me logo Genes that share expression patterns with SNORD64: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD64 Gene

Orthologs for SNORD64 Gene

Evolution for SNORD64 Gene

ENSEMBL:
Gene Tree for SNORD64 (if available)
TreeFam:
Gene Tree for SNORD64 (if available)

No data available for Orthologs for SNORD64 Gene

Paralogs for SNORD64 Gene

No data available for Paralogs for SNORD64 Gene

Variants for SNORD64 Gene

Sequence variations from dbSNP and Humsavar for SNORD64 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000199893 -- 24,984,045(+) TAGAA(-/AT)ATGAT downstream-variant-500B, upstream-variant-2KB
rs1000535322 -- 24,985,383(+) CTCAT(C/T)TTTGG nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB
rs1003184772 -- 24,985,497(+) AATTT(G/T)TGTAT nc-transcript-variant, downstream-variant-500B, upstream-variant-2KB
rs1006440404 -- 24,983,424(+) AAATC(A/G)GCAAC nc-transcript-variant, upstream-variant-2KB
rs1006448049 -- 24,983,655(+) TGGTG(A/G)TGTGT nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD64 Gene

Variant ID Type Subtype PubMed ID
nsv1044125 CNV loss 25217958
nsv1045067 CNV gain 25217958

Relevant External Links for SNORD64 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD64

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD64 Gene

Disorders for SNORD64 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNORD64 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
prader-willi syndrome
  • prader willi syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for SNORD64

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD64
genes like me logo Genes that share disorders with SNORD64: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNORD64 Gene

Publications for SNORD64 Gene

  1. Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization. (PMID: 11106375) Cavaillé J … Hüttenhofer A (Proceedings of the National Academy of Sciences of the United States of America 2000) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60

Products for SNORD64 Gene

Sources for SNORD64 Gene

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