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Aliases for SNORD63 Gene

Subcategory (RNA class) for SNORD63 Gene


Quality Score for this RNA gene is


Aliases for SNORD63 Gene

  • Small Nucleolar RNA, C/D Box 63 2 3 5
  • RNA, U63 Small Nucleolar 2 3
  • SNORD63A 3
  • RNU63 3
  • U63 3

External Ids for SNORD63 Gene

Previous HGNC Symbols for SNORD63 Gene

  • RNU63

Previous GeneCards Identifiers for SNORD63 Gene

  • GC05M137926
  • GC05M133087
  • GC05M137897
  • GC05M137901

Summaries for SNORD63 Gene

GeneCards Summary for SNORD63 Gene

SNORD63 (Small Nucleolar RNA, C/D Box 63) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD63 include Ablepharon-Macrostomia Syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD63 Gene

Genomics for SNORD63 Gene

Regulatory Elements for SNORD63 Gene

Enhancers for SNORD63 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F138532 0.7 FANTOM5 13.1 +28.4 28426 0.3 ZNF664 ENSG00000222937 SNORD63 HSPA9 CTNNA1 FAM53C KDM3B FAM13B ETF1 GC05P138492
GH05F138528 1.1 ENCODE 12.7 +32.0 31992 2.0 PKNOX1 ZNF121 GATA2 SCRT2 CREM THAP11 HMG20B CEBPB KAT8 ZNF217 ENSG00000222937 SNORD63 HSPA9 ETF1 GC05P138492
GH05F138458 1 FANTOM5 Ensembl ENCODE 11.6 +101.1 101110 4.0 ELF3 PKNOX1 ATF1 MLX ARID4B FEZF1 ZSCAN9 DNMT3B RARA SLC30A9 REEP2 ENSG00000222937 SNORD63 HSPA9 LRRTM2 CDC25C FAM53C FAM13B ETF1 EGR1
GH05F138479 0.9 FANTOM5 11 +81.2 81202 0.4 REEP2 HSPA9 ENSG00000222937 SNORD63 BRD8 RPL7P19 GC05P138492
GH05F138438 0.6 ENCODE 10.9 +121.8 121769 1.9 ZFP64 ZEB1 ZNF23 GLIS2 EGR1 ZNF366 ZNF391 EGR2 ZEB2 ZNF623 ENSG00000222937 SNORD63 HSPA9 REEP2 GC05P138442
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around SNORD63 on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD63 Gene

138,561,043 bp from pter
138,561,110 bp from pter
68 bases
Minus strand

Genomic View for SNORD63 Gene

Genes around SNORD63 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD63 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD63 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD63 Gene

Proteins for SNORD63 Gene

Post-translational modifications for SNORD63 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD63 Gene

Domains & Families for SNORD63 Gene

Gene Families for SNORD63 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD63: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD63 Gene

Function for SNORD63 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD63 Gene

Localization for SNORD63 Gene

Subcellular locations from

Jensen Localization Image for SNORD63 Gene COMPARTMENTS Subcellular localization image for SNORD63 gene
Compartment Confidence
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for SNORD63 Gene

Pathways & Interactions for SNORD63 Gene

SuperPathways for SNORD63 Gene

No Data Available

Interacting Proteins for SNORD63 Gene

Gene Ontology (GO) - Biological Process for SNORD63 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD63 Gene

Transcripts for SNORD63 Gene

mRNA/cDNA for SNORD63 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD63 Gene

No ASD Table

Relevant External Links for SNORD63 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD63 Gene

mRNA expression in normal human tissues for SNORD63 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD63 Gene:

genes like me logo Genes that share expression patterns with SNORD63: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD63 Gene

Orthologs for SNORD63 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD63 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD63 35
  • 100 (a)
(Mus musculus)
Mammalia Gm26109 35
  • 83 (a)
(Canis familiaris)
Mammalia SNORD63 35
  • 80 (a)
(Bos Taurus)
Mammalia SNORD63 35
  • 78 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD63 35
  • 75 (a)
(Monodelphis domestica)
Mammalia SNORD63 35
  • 65 (a)
(Gallus gallus)
Aves SNORD63 35
  • 74 (a)
(Anolis carolinensis)
Reptilia SNORD63 35
  • 72 (a)
(Danio rerio)
Actinopterygii SNORD63 35
  • 66 (a)
Species where no ortholog for SNORD63 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD63 Gene

Gene Tree for SNORD63 (if available)
Gene Tree for SNORD63 (if available)

Paralogs for SNORD63 Gene

No data available for Paralogs for SNORD63 Gene

Variants for SNORD63 Gene

Sequence variations from dbSNP and Humsavar for SNORD63 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs10652442 -- 138,560,916(+) TTTTT(-/T)TTTTT intron-variant, downstream-variant-500B
rs112918142 -- 138,561,944(+) AATAC(-/T/TT)TTTTT intron-variant, upstream-variant-2KB
rs113445354 -- 138,560,723(+) TTTTA(C/T)ATTTT intron-variant, downstream-variant-500B
rs11379822 -- 138,560,908(+) TTTTT(-/TT)GCATA intron-variant, downstream-variant-500B
rs138138196 -- 138,562,403(+) AAAAT(C/T)AGCCG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD63 Gene

Variant ID Type Subtype PubMed ID
nsv599818 CNV loss 21841781

Relevant External Links for SNORD63 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD63 Gene

Disorders for SNORD63 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNORD63 Gene - From: DISEASES

Disorder Aliases PubMed IDs
ablepharon-macrostomia syndrome
  • ablepharon macrostomia syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for SNORD63

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SNORD63: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNORD63 Gene

Publications for SNORD63 Gene

  1. Integrated genomic analysis implicates haploinsufficiency of multiple chromosome 5q31.2 genes in de novo myelodysplastic syndromes pathogenesis. (PMID: 19240791) Graubert T.A. … Walter M.J. (PLoS ONE 2009) 3 46 64
  2. A small nucleolar RNA requirement for site-specific ribose methylation of rRNA in Xenopus. (PMID: 8962077) Tycowski K.T. … Steitz J.A. (Proc. Natl. Acad. Sci. U.S.A. 1996) 2 3 64
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD63 Gene

Sources for SNORD63 Gene

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