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Aliases for SNORD58C Gene

Subcategory (RNA class) for SNORD58C Gene


Quality Score for this RNA gene is


Aliases for SNORD58C Gene

  • Small Nucleolar RNA, C/D Box 58C 2 3
  • U58 Small Nucleolar RNA 3
  • SNORD58C SnoRNA 3
  • U58 SnoRNA 3
  • U58 3

External Ids for SNORD58C Gene

ORGUL Members for SNORD58C Gene

Previous GeneCards Identifiers for SNORD58C Gene

  • GC18U900345
  • GC18M045312
  • GC18M047015
  • GC18M043869

Summaries for SNORD58C Gene

GeneCards Summary for SNORD58C Gene

SNORD58C (Small Nucleolar RNA, C/D Box 58C) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD58C Gene

Genomics for SNORD58C Gene

Regulatory Elements for SNORD58C Gene

Genomic Location for SNORD58C Gene

49,489,235 bp from pter
49,489,324 bp from pter
90 bases
Minus strand

Genomic View for SNORD58C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SNORD58C Gene

Proteins for SNORD58C Gene

Post-translational modifications for SNORD58C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD58C Gene

Domains & Families for SNORD58C Gene

Gene Families for SNORD58C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD58C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD58C Gene

Function for SNORD58C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD58C Gene

Localization for SNORD58C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD58C Gene

Pathways & Interactions for SNORD58C Gene

SuperPathways for SNORD58C Gene

No Data Available

Interacting Proteins for SNORD58C Gene

Gene Ontology (GO) - Biological Process for SNORD58C Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD58C Gene

Drugs & Compounds for SNORD58C Gene

No Compound Related Data Available

Transcripts for SNORD58C Gene

mRNA/cDNA for SNORD58C Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD58C Gene

No ASD Table

Relevant External Links for SNORD58C Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD58C Gene

mRNA expression in normal human tissues for SNORD58C Gene

genes like me logo Genes that share expression patterns with SNORD58C: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD58C Gene

Orthologs for SNORD58C Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD58C Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia SNORD58 36
  • 94 (a)
(Canis familiaris)
Mammalia SNORD58 36
  • 86 (a)
(Monodelphis domestica)
Mammalia SNORD58 36
  • 74 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD58 36
  • 82 (a)
(Pan troglodytes)
Mammalia SNORD58 36
  • 100 (a)
(Gallus gallus)
Aves SNORD58 36
  • 75 (a)
SNORD58 36
  • 78 (a)
SNORD58 36
  • 75 (a)
SNORD58 36
  • 78 (a)
(Anolis carolinensis)
Reptilia SNORD58 36
  • 72 (a)
Species with no ortholog for SNORD58C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD58C Gene

Gene Tree for SNORD58C (if available)
Gene Tree for SNORD58C (if available)

Paralogs for SNORD58C Gene

No data available for Paralogs for SNORD58C Gene

Variants for SNORD58C Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD58C Gene

Variant ID Type Subtype PubMed ID
nsv2294 CNV Loss 18451855

Relevant External Links for SNORD58C Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD58C Gene

Disorders for SNORD58C Gene

Relevant External Links for SNORD58C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SNORD58C: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD58C Gene

Publications for SNORD58C Gene

  1. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67
  2. snoSeeker: an advanced computational package for screening of guide and orphan snoRNA genes in the human genome. (PMID: 16990247) Yang J.H. … Qu L.H. (Nucleic Acids Res. 2006) 67
  3. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. (PMID: 11875025) Yoshihama M. … Kenmochi N. (Genome Res. 2002) 67

Products for SNORD58C Gene

Sources for SNORD58C Gene

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