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Aliases for SNORD57 Gene

Subcategory (RNA class) for SNORD57 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD57 Gene

  • Small Nucleolar RNA, C/D Box 57 2 3 5
  • RNA, U57 Small Nuclear 2 3
  • RNU57 3
  • U57 3

External Ids for SNORD57 Gene

Previous HGNC Symbols for SNORD57 Gene

  • RNU57

Previous GeneCards Identifiers for SNORD57 Gene

  • GC20P002592
  • GC20P002594
  • GC20P002598
  • GC20P002605
  • GC20P002610
  • GC20P002617
  • GC20P002638
  • GC20P002647
  • GC20P002659
  • GC20P002664
  • GC20P002674
  • GC20P002686
  • GC20P002695
  • GC20P002705
  • GC20P002720
  • GC20P002733
  • GC20P002752
  • GC20P002779

Summaries for SNORD57 Gene

GeneCards Summary for SNORD57 Gene

SNORD57 (Small Nucleolar RNA, C/D Box 57) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD57 Gene

Genomics for SNORD57 Gene

Regulatory Elements for SNORD57 Gene

Genomic Location for SNORD57 Gene

Chromosome:
20
Start:
2,656,939 bp from pter
End:
2,657,010 bp from pter
Size:
72 bases
Orientation:
Plus strand

Genomic View for SNORD57 Gene

Genes around SNORD57 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD57 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD57 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD57 Gene

Proteins for SNORD57 Gene

Post-translational modifications for SNORD57 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD57 Gene

Domains & Families for SNORD57 Gene

Gene Families for SNORD57 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD57: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD57 Gene

Function for SNORD57 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD57 Gene

Localization for SNORD57 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD57 Gene

Pathways & Interactions for SNORD57 Gene

SuperPathways for SNORD57 Gene

No Data Available

Interacting Proteins for SNORD57 Gene

Gene Ontology (GO) - Biological Process for SNORD57 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD57 Gene

Drugs & Compounds for SNORD57 Gene

No Compound Related Data Available

Transcripts for SNORD57 Gene

mRNA/cDNA for SNORD57 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD57 Gene

No ASD Table

Relevant External Links for SNORD57 Gene

GeneLoc Exon Structure for
SNORD57
ECgene alternative splicing isoforms for
SNORD57

Expression for SNORD57 Gene

mRNA expression in normal human tissues for SNORD57 Gene

genes like me logo Genes that share expression patterns with SNORD57: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD57 Gene

Orthologs for SNORD57 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD57 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD57 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD57 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD57 36
  • 93 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Snord57 36
  • 81 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD57 36
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD57 36
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD57 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia SNORD57 36
  • 74 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD57 36
  • 75 (a)
OneToOne
Species with no ortholog for SNORD57:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD57 Gene

ENSEMBL:
Gene Tree for SNORD57 (if available)
TreeFam:
Gene Tree for SNORD57 (if available)

Paralogs for SNORD57 Gene

No data available for Paralogs for SNORD57 Gene

Variants for SNORD57 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD57 Gene

Variant ID Type Subtype PubMed ID
nsv470535 CNV Gain 18288195

Relevant External Links for SNORD57 Gene

HapMap Linkage Disequilibrium report
SNORD57

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD57 Gene

Disorders for SNORD57 Gene

Relevant External Links for SNORD57

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD57

No disorders were found for SNORD57 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD57 Gene

Publications for SNORD57 Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD57 Gene

Sources for SNORD57 Gene

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