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Aliases for SNORD50A Gene

Subcategory (RNA class) for SNORD50A Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD50A Gene

  • Small Nucleolar RNA, C/D Box 50A 2 3
  • RNA, U50 Small Nuclear 2 3
  • RNU50 3 6
  • U50 3

External Ids for SNORD50A Gene

ORGUL Members for SNORD50A Gene

Previous HGNC Symbols for SNORD50A Gene

  • RNU50

Previous GeneCards Identifiers for SNORD50A Gene

  • GC06M086448
  • GC06M086452
  • GC06M086455
  • GC06M086458
  • GC06M086459
  • GC06M086463
  • GC06M086389
  • GC06M086391
  • GC06M083612
  • GC06M086393

Summaries for SNORD50A Gene

Entrez Gene Summary for SNORD50A Gene

  • SNORD50A belongs to the C/D box class of small nucleolar RNAs (snoRNAs), which are thought to function as guide RNAs in the site-specific ribose methylation of preribosomal RNA (Kiss-Laszlo et al., 1996 [PubMed 8674114]).[supplied by OMIM, Nov 2009]

GeneCards Summary for SNORD50A Gene

SNORD50A (Small Nucleolar RNA, C/D Box 50A) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD50A include b-cell lymphomas and multiple myeloma.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD50A Gene

Genomics for SNORD50A Gene

Regulatory Elements for SNORD50A Gene

Genomic Location for SNORD50A Gene

Start:
85,677,294 bp from pter
End:
85,677,368 bp from pter
Size:
75 bases
Orientation:
Minus strand

Genomic View for SNORD50A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD50A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD50A Gene

Proteins for SNORD50A Gene

Post-translational modifications for SNORD50A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD50A Gene

Domains for SNORD50A Gene

Gene Families for SNORD50A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD50A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD50A Gene

Function for SNORD50A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD50A Gene

Localization for SNORD50A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD50A Gene

Pathways for SNORD50A Gene

SuperPathways for SNORD50A Gene

No Data Available

Interacting Proteins for SNORD50A Gene

Gene Ontology (GO) - Biological Process for SNORD50A Gene

None

No data available for Pathways by source for SNORD50A Gene

Transcripts for SNORD50A Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD50A Gene

No ASD Table

Relevant External Links for SNORD50A Gene

GeneLoc Exon Structure for
SNORD50A
ECgene alternative splicing isoforms for
SNORD50A

No data available for mRNA/cDNA for SNORD50A Gene

Expression for SNORD50A Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD50A Gene

Orthologs for SNORD50A Gene

No data available for Orthologs and Evolution for SNORD50A Gene

Paralogs for SNORD50A Gene

No data available for Paralogs for SNORD50A Gene

Variants for SNORD50A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD50A Gene

Variant ID Type Subtype PubMed ID
nsv886334 CNV Loss 21882294

Relevant External Links for SNORD50A Gene

HapMap Linkage Disequilibrium report
SNORD50A
Human Gene Mutation Database (HGMD)
SNORD50A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD50A Gene

Disorders for SNORD50A Gene

MalaCards: The human disease database

MalaCards: The human disease database. (2) Diseases for SNORD50A Gene including...

Search for SNORD50A Gene in MalaCards »

Relevant External Links for SNORD50A

Genetic Association Database (GAD)
SNORD50A
Human Genome Epidemiology (HuGE) Navigator
SNORD50A
genes like me logo Genes that share disorders with SNORD50A: view

No data available for UniProtKB/Swiss-Prot for SNORD50A Gene

Publications for SNORD50A Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 3
  2. Implication of snoRNA U50 in human breast cancer. (PMID: 19683667) Dong X.Y. … Dong J.T. (J Genet Genomics 2009) 3 48
  3. Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress. (PMID: 22751105) Chu L. … Tomasson M.H. (J. Clin. Invest. 2012) 3
  4. Intronic U50 small-nucleolar-RNA (snoRNA) host gene of no protein-coding potential is mapped at the chromosome breakpoint t(3;6)(q27;q15) of human B-cell lymphoma. (PMID: 10792466) Tanaka R. … Mori S. (Genes Cells 2000) 3
  5. SnoRNA U50 is a candidate tumor-suppressor gene at 6q14.3 with a mutation associated with clinically significant prostate cancer. (PMID: 18202102) Dong X.Y. … Dong J.T. (Hum. Mol. Genet. 2008) 3

Products for SNORD50A Gene

Sources for SNORD50A Gene

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