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Aliases for SNORD49A Gene

Subcategory (RNA class) for SNORD49A Gene


Quality Score for this RNA gene is


Aliases for SNORD49A Gene

  • Small Nucleolar RNA, C/D Box 49A 2 3 5
  • RNA, U49 Small Nuclear 2 3
  • RNU49 3
  • U49A 3
  • U49 3

External Ids for SNORD49A Gene

Previous HGNC Symbols for SNORD49A Gene

  • RNU49

Previous GeneCards Identifiers for SNORD49A Gene

  • GC17P016293
  • GC17P016298
  • GC17P016343
  • GC17P016211

Summaries for SNORD49A Gene

GeneCards Summary for SNORD49A Gene

SNORD49A (Small Nucleolar RNA, C/D Box 49A) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD49A Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD49A Gene

Genomics for SNORD49A Gene

Regulatory Elements for SNORD49A Gene

Genomic Locations for SNORD49A Gene

Genomic Locations for SNORD49A Gene
71 bases
Plus strand

Genomic View for SNORD49A Gene

Genes around SNORD49A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD49A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD49A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD49A Gene

Proteins for SNORD49A Gene

Post-translational modifications for SNORD49A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD49A Gene

Domains & Families for SNORD49A Gene

Gene Families for SNORD49A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD49A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD49A Gene

Function for SNORD49A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD49A Gene

Localization for SNORD49A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD49A Gene

Pathways & Interactions for SNORD49A Gene

SuperPathways for SNORD49A Gene

No Data Available

Interacting Proteins for SNORD49A Gene

Gene Ontology (GO) - Biological Process for SNORD49A Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD49A Gene

Drugs & Compounds for SNORD49A Gene

No Compound Related Data Available

Transcripts for SNORD49A Gene

mRNA/cDNA for SNORD49A Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD49A Gene

No ASD Table

Relevant External Links for SNORD49A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD49A Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD49A Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD49A Gene

Orthologs for SNORD49A Gene

Evolution for SNORD49A Gene

Gene Tree for SNORD49A (if available)
Gene Tree for SNORD49A (if available)

No data available for Orthologs for SNORD49A Gene

Paralogs for SNORD49A Gene

No data available for Paralogs for SNORD49A Gene

Variants for SNORD49A Gene

Sequence variations from dbSNP and Humsavar for SNORD49A Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1001416138 -- 16,439,012(+) CTTAA(G/T)GGCCT nc-transcript-variant, upstream-variant-2KB
rs1001938282 -- 16,440,339(+) CCTAA(C/T)ACCTT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1002456121 -- 16,440,499(+) TCAGA(C/T)GTGAA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1002613980 -- 16,438,309(+) TTTTT(C/T)AAGGA upstream-variant-2KB
rs1003345672 -- 16,439,124(+) GAGCT(C/T)CTGTG intron-variant, nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD49A Gene

Variant ID Type Subtype PubMed ID
nsv1063764 CNV loss 25217958
esv2715702 CNV deletion 23290073

Relevant External Links for SNORD49A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD49A Gene

Disorders for SNORD49A Gene

Relevant External Links for SNORD49A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD49A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD49A Gene

Publications for SNORD49A Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-László Z … Kiss T (Cell 1996) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60

Products for SNORD49A Gene

Sources for SNORD49A Gene

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