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Aliases for SNORD47 Gene

Subcategory (RNA class) for SNORD47 Gene


Quality Score for this RNA gene is


Aliases for SNORD47 Gene

  • Small Nucleolar RNA, C/D Box 47 2 3
  • RNA, U47 Small Nuclear 2 3
  • RNU47 3
  • U47 3

External Ids for SNORD47 Gene

Previous HGNC Symbols for SNORD47 Gene

  • RNU47

Previous GeneCards Identifiers for SNORD47 Gene

  • GC01M172109
  • GC01M172118
  • GC01M172126
  • GC01M172134
  • GC01M172143
  • GC01M172147
  • GC01M172158
  • GC01M172171
  • GC01M173836
  • GC01M173852
  • GC01M173861
  • GC01M173871
  • GC01M173881
  • GC01M173890
  • GC01M173904
  • GC01M173917
  • GC01M173933
  • GC01M173943

Summaries for SNORD47 Gene

GeneCards Summary for SNORD47 Gene

SNORD47 (Small Nucleolar RNA, C/D Box 47) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD47 Gene

Genomics for SNORD47 Gene

Regulatory Elements for SNORD47 Gene

Genomic Location for SNORD47 Gene

173,864,369 bp from pter
173,864,445 bp from pter
77 bases
Minus strand

Genomic View for SNORD47 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for SNORD47 Gene

Proteins for SNORD47 Gene

Post-translational modifications for SNORD47 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD47 Gene

Domains & Families for SNORD47 Gene

Gene Families for SNORD47 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD47: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD47 Gene

Function for SNORD47 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD47 Gene

Localization for SNORD47 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD47 Gene

Pathways & Interactions for SNORD47 Gene

SuperPathways for SNORD47 Gene

No Data Available

Interacting Proteins for SNORD47 Gene

Gene Ontology (GO) - Biological Process for SNORD47 Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD47 Gene

Drugs & Compounds for SNORD47 Gene

No Compound Related Data Available

Transcripts for SNORD47 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD47 Gene

No ASD Table

Relevant External Links for SNORD47 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD47 Gene

No Expression Related Data Available

Primer Products

In Situ Assay Products

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD47 Gene

Orthologs for SNORD47 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for SNORD47 Gene

Organism Taxonomy Gene Similarity Type Details
(Mus musculus)
Mammalia Snord47 16
Species with no ortholog for SNORD47:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for SNORD47 Gene

Paralogs for SNORD47 Gene

No data available for Paralogs for SNORD47 Gene

Variants for SNORD47 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD47 Gene

Variant ID Type Subtype PubMed ID
nsv831926 CNV Gain+Loss 17160897
dgv149e1 CNV Complex 17122850

Relevant External Links for SNORD47 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for SNORD47 Gene

Disorders for SNORD47 Gene

Relevant External Links for SNORD47

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with SNORD47: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD47 Gene

Publications for SNORD47 Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 67

Products for SNORD47 Gene

Sources for SNORD47 Gene

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