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Aliases for SNORD45C Gene

Subcategory (RNA class) for SNORD45C Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD45C Gene

  • Small Nucleolar RNA, C/D Box 45C 2 3
  • U45C 3

External Ids for SNORD45C Gene

ORGUL Members for SNORD45C Gene

Previous GeneCards Identifiers for SNORD45C Gene

  • GC01U901230
  • GC01P076028
  • GC01P076029
  • GC01P076030
  • GC01P076031
  • GC01P076032
  • GC01P076033
  • GC01P076254
  • GC01P074382
  • GC01P076257
  • GC01P076263

Summaries for SNORD45C Gene

GeneCards Summary for SNORD45C Gene

SNORD45C (Small Nucleolar RNA, C/D Box 45C) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD45C Gene

Genomics for SNORD45C Gene

Regulatory Elements for SNORD45C Gene

Genomic Location for SNORD45C Gene

Start:
75,787,072 bp from pter
End:
75,787,150 bp from pter
Size:
79 bases
Orientation:
Plus strand

Genomic View for SNORD45C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD45C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD45C Gene

Proteins for SNORD45C Gene

Post-translational modifications for SNORD45C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD45C Gene

Domains for SNORD45C Gene

Gene Families for SNORD45C Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD45C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD45C Gene

Function for SNORD45C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD45C Gene

Localization for SNORD45C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD45C Gene

Pathways for SNORD45C Gene

SuperPathways for SNORD45C Gene

No Data Available

Interacting Proteins for SNORD45C Gene

Gene Ontology (GO) - Biological Process for SNORD45C Gene

None

No data available for Pathways by source for SNORD45C Gene

Transcripts for SNORD45C Gene

mRNA/cDNA for SNORD45C Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD45C Gene

No ASD Table

Relevant External Links for SNORD45C Gene

GeneLoc Exon Structure for
SNORD45C
ECgene alternative splicing isoforms for
SNORD45C

Expression for SNORD45C Gene

mRNA expression in normal human tissues for SNORD45C Gene

genes like me logo Genes that share expressions with SNORD45C: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD45C Gene

Orthologs for SNORD45C Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD45C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD45 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD45 36
  • 79 (a)
ManyToMany
SNORD45 36
  • 97 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORD45 36
  • 92 (a)
ManyToMany
SNORD45 36
  • 90 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Snord45c 16
Snord45c 36
  • 95 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD45 36
  • 86 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SNORD45 36
  • 74 (a)
ManyToMany
SNORD45 36
  • 71 (a)
ManyToMany
Species with no ortholog for SNORD45C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD45C Gene

ENSEMBL:
Gene Tree for SNORD45C (if available)
TreeFam:
Gene Tree for SNORD45C (if available)

Paralogs for SNORD45C Gene

No data available for Paralogs for SNORD45C Gene

Variants for SNORD45C Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD45C Gene

Variant ID Type Subtype PubMed ID
nsv519329 CNV Gain 19592680

Relevant External Links for SNORD45C Gene

HapMap Linkage Disequilibrium report
SNORD45C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD45C Gene

Disorders for SNORD45C Gene

No disorders were found for SNORD45C Gene.

No data available for UniProtKB/Swiss-Prot for SNORD45C Gene

Publications for SNORD45C Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD45C Gene

Sources for SNORD45C Gene

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