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Aliases for SNORD45A Gene

Subcategory (RNA class) for SNORD45A Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD45A Gene

  • Small Nucleolar RNA, C/D Box 45A 2 3
  • RNA, U45A Small Nuclear 2 3
  • RNU45A 3
  • U45a 3

External Ids for SNORD45A Gene

ORGUL Members for SNORD45A Gene

Previous Symbols for SNORD45A Gene

  • RNU45A

Summaries for SNORD45A Gene

GeneCards Summary for SNORD45A Gene

SNORD45A (Small Nucleolar RNA, C/D Box 45A) is an RNA Gene, and belongs to the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD45A Gene

Genomics for SNORD45A Gene

Genomic Location for SNORD45A Gene

Start:
75,787,889 bp from pter
End:
75,787,972 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for SNORD45A Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD45A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD45A Gene

Regulatory Elements for SNORD45A Gene

Proteins for SNORD45A Gene

Post-translational modifications for SNORD45A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD45A Gene

Domains for SNORD45A Gene

Gene Families for SNORD45A Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD45A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD45A Gene

Function for SNORD45A Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD45A Gene

Localization for SNORD45A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD45A Gene

Pathways for SNORD45A Gene

SuperPathways for SNORD45A Gene

No Data Available

Interacting Proteins for SNORD45A Gene

Gene Ontology (GO) - Biological Process for SNORD45A Gene

None

No data available for Pathways by source for SNORD45A Gene

Transcripts for SNORD45A Gene

mRNA/cDNA for SNORD45A Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD45A Gene

No ASD Table

Relevant External Links for SNORD45A Gene

GeneLoc Exon Structure for
SNORD45A
ECgene alternative splicing isoforms for
SNORD45A

Expression for SNORD45A Gene

mRNA expression in normal human tissues for SNORD45A Gene

genes like me logo Genes that share expressions with SNORD45A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD45A Gene

Orthologs for SNORD45A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD45A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD45 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD45 36
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD45 36
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm24494 36
  • 86 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD45 36
  • 78 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD45 36
  • 90 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD45 36
  • 82 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD45 36
  • 80 (a)
OneToMany
Species with no ortholog for SNORD45A:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD45A Gene

ENSEMBL:
Gene Tree for SNORD45A (if available)
TreeFam:
Gene Tree for SNORD45A (if available)

Paralogs for SNORD45A Gene

No data available for Paralogs for SNORD45A Gene

Variants for SNORD45A Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD45A Gene

Variant ID Type Subtype PubMed ID
nsv519329 CNV Gain 19592680

Relevant External Links for SNORD45A Gene

HapMap Linkage Disequilibrium report
SNORD45A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD45A Gene

Disorders for SNORD45A Gene

No disorders were found for SNORD45A Gene.

No data available for UniProtKB/Swiss-Prot for SNORD45A Gene

Publications for SNORD45A Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD45A Gene

Sources for SNORD45A Gene

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