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Aliases for SNORD44 Gene

Subcategory (RNA class) for SNORD44 Gene

snoRNA

Quality Score for this RNA gene is

2

Aliases for SNORD44 Gene

  • Small Nucleolar RNA, C/D Box 44 2 3
  • RNA, U44 Small Nuclear 2 3
  • RNU44 3
  • U44 3

External Ids for SNORD44 Gene

ORGUL Members for SNORD44 Gene

Previous HGNC Symbols for SNORD44 Gene

  • RNU44

Previous GeneCards Identifiers for SNORD44 Gene

  • GC01M172110
  • GC01M172119
  • GC01M172127
  • GC01M172135
  • GC01M172144
  • GC01M172148
  • GC01M172159
  • GC01M172172
  • GC01M173839
  • GC01M173846
  • GC01M173853
  • GC01M173863
  • GC01M173873
  • GC01M173882
  • GC01M173891
  • GC01M173906
  • GC01M173918
  • GC01M173936
  • GC01M173946
  • GC01M173960
  • GC01M173976
  • GC01M173984

Summaries for SNORD44 Gene

GeneCards Summary for SNORD44 Gene

SNORD44 (Small Nucleolar RNA, C/D Box 44) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD44 Gene

Genomics for SNORD44 Gene

Regulatory Elements for SNORD44 Gene


Promoters for SNORD44 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000547888 -1572 4001 HDGF PKNOX1 ARNT CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1

Genomic Location for SNORD44 Gene

Chromosome:
1
Start:
173,865,968 bp from pter
End:
173,866,028 bp from pter
Size:
61 bases
Orientation:
Minus strand

Genomic View for SNORD44 Gene

Genes around SNORD44 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD44 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD44 Gene

Proteins for SNORD44 Gene

Post-translational modifications for SNORD44 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD44 Gene

Domains & Families for SNORD44 Gene

Gene Families for SNORD44 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD44: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD44 Gene

Function for SNORD44 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD44 Gene

Localization for SNORD44 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD44 Gene

Pathways & Interactions for SNORD44 Gene

SuperPathways for SNORD44 Gene

No Data Available

Interacting Proteins for SNORD44 Gene

Gene Ontology (GO) - Biological Process for SNORD44 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD44 Gene

Transcripts for SNORD44 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD44 Gene

No ASD Table

Relevant External Links for SNORD44 Gene

GeneLoc Exon Structure for
SNORD44
ECgene alternative splicing isoforms for
SNORD44

No data available for mRNA/cDNA for SNORD44 Gene

Expression for SNORD44 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD44 Gene:

SNORD44
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for SNORD44 Gene

Orthologs for SNORD44 Gene

No data available for Orthologs and Evolution for SNORD44 Gene

Paralogs for SNORD44 Gene

No data available for Paralogs for SNORD44 Gene

Variants for SNORD44 Gene

Sequence variations from dbSNP and Humsavar for SNORD44 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs112023202 -- 173,866,568(+) AGGAC(C/G/T)TGGGA downstream-variant-500B, upstream-variant-2KB, splice-acceptor-variant
rs112154254 -- 173,867,978(+) ACTCC(C/T)ACCTC nc-transcript-variant, upstream-variant-2KB
rs112279140 -- 173,866,758(+) CAACT(G/T)ACTTC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs112727149 -- 173,866,800(+) AACTA(G/T)AAAAC intron-variant, downstream-variant-500B, upstream-variant-2KB
rs113363379 -- 173,867,317(+) GAGTT(C/G)AAGAC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for SNORD44 Gene

Variant ID Type Subtype PubMed ID
esv2758978 CNV loss 17122850
nsv831926 CNV gain+loss 17160897

Relevant External Links for SNORD44 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD44

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD44 Gene

Disorders for SNORD44 Gene

Relevant External Links for SNORD44

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD44

No disorders were found for SNORD44 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD44 Gene

Publications for SNORD44 Gene

  1. Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs. (PMID: 8674114) Kiss-LA!szlA^ Z. … Kiss T. (Cell 1996) 2 3 64
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3 64

Products for SNORD44 Gene

Sources for SNORD44 Gene

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