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Aliases for SNORD3H Gene

Subcategory (RNA class) for SNORD3H Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD3H Gene

  • Small Nucleolar RNA, C/D Box 3H 2 3 5

External Ids for SNORD3H Gene

ORGUL Members for SNORD3H Gene

Previous GeneCards Identifiers for SNORD3H Gene

  • GC00U936728
  • GC08U902725

Summaries for SNORD3H Gene

GeneCards Summary for SNORD3H Gene

SNORD3H (Small Nucleolar RNA, C/D Box 3H) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD3H Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD3H Gene

Genomics for SNORD3H Gene

Regulatory Elements for SNORD3H Gene

Enhancers for SNORD3H Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H097361 0.6 Ensembl 0.7 +3.7 3712 0 MAFG MAX ZIC2 RAD21 YY1 ZNF316 NFE2 HNF4A MAFK NFE2L2 SNORD3H GC08M097431
GH08H097375 0.8 ENCODE 0.4 +17.6 17593 0 ELF3 SOX13 CTCF TFAP4 SAP130 ARID4B CEBPG ZNF644 RAD21 TEAD3 SNORD3H GC08M097431
GH08H097425 0.6 Ensembl ENCODE 0.2 +68.5 68481 1 REST GC08M097431 SNORD3H
GH08H097424 0.6 ENCODE 0.2 +66.0 65983 0 FOXA2 MAX REST RAD21 NR2F2 JUND ATF3 HNF4A FOS TCF7L2 TSPYL5 GC08M097431 SNORD3H
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD3H on UCSC Golden Path with GeneCards custom track

Genomic Location for SNORD3H Gene

Chromosome:
8
Start:
97,358,265 bp from pter
End:
97,358,478 bp from pter
Size:
214 bases
Orientation:
Plus strand

Genomic View for SNORD3H Gene

Genes around SNORD3H on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD3H Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD3H Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for SNORD3H Gene

Proteins for SNORD3H Gene

Post-translational modifications for SNORD3H Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD3H Gene

Domains & Families for SNORD3H Gene

Gene Families for SNORD3H Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD3H: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD3H Gene

Function for SNORD3H Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD3H Gene

Localization for SNORD3H Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD3H Gene

Pathways & Interactions for SNORD3H Gene

SuperPathways for SNORD3H Gene

No Data Available

Interacting Proteins for SNORD3H Gene

Gene Ontology (GO) - Biological Process for SNORD3H Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD3H Gene

Drugs & Compounds for SNORD3H Gene

No Compound Related Data Available

Transcripts for SNORD3H Gene

mRNA/cDNA for SNORD3H Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD3H Gene

No ASD Table

Relevant External Links for SNORD3H Gene

GeneLoc Exon Structure for
SNORD3H
ECgene alternative splicing isoforms for
SNORD3H

Expression for SNORD3H Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD3H Gene

Orthologs for SNORD3H Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for SNORD3H Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia U3 34
  • 99 (a)
OneToOne
Species where no ortholog for SNORD3H was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD3H Gene

ENSEMBL:
Gene Tree for SNORD3H (if available)
TreeFam:
Gene Tree for SNORD3H (if available)

Paralogs for SNORD3H Gene

No data available for Paralogs for SNORD3H Gene

Variants for SNORD3H Gene

Relevant External Links for SNORD3H Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD3H

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for SNORD3H Gene

Disorders for SNORD3H Gene

Relevant External Links for SNORD3H

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD3H

No disorders were found for SNORD3H Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD3H Gene

Publications for SNORD3H Gene

  1. An updated human snoRNAome. (PMID: 27174936) Jorjani H … Gruber AR (Nucleic acids research 2016) 2 3 60

Products for SNORD3H Gene

Sources for SNORD3H Gene

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