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Aliases for SNORD38B Gene

Subcategory (RNA class) for SNORD38B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD38B Gene

  • Small Nucleolar RNA, C/D Box 38B 2 3 5
  • RNA, U38B Small Nucleolar 2 3
  • U38B Small Nucleolar RNA 3
  • U38B SnoRNA 3
  • RNU38B 3
  • U38B 3

External Ids for SNORD38B Gene

Previous HGNC Symbols for SNORD38B Gene

  • RNU38B

Previous GeneCards Identifiers for SNORD38B Gene

  • GC01P045018
  • GC01P045244
  • GC01P045246
  • GC01P043357
  • GC01P044779
  • GC01P044786

Summaries for SNORD38B Gene

GeneCards Summary for SNORD38B Gene

SNORD38B (Small Nucleolar RNA, C/D Box 38B) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are Viral mRNA Translation.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD38B Gene

Genomics for SNORD38B Gene

Regulatory Elements for SNORD38B Gene


Genomic Location for SNORD38B Gene

Chromosome:
1
Start:
44,778,390 bp from pter
End:
44,778,458 bp from pter
Size:
69 bases
Orientation:
Plus strand

Genomic View for SNORD38B Gene

Genes around SNORD38B on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD38B Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD38B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD38B Gene

Proteins for SNORD38B Gene

Post-translational modifications for SNORD38B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD38B Gene

Domains & Families for SNORD38B Gene

Gene Families for SNORD38B Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD38B: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD38B Gene

Function for SNORD38B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD38B Gene

Localization for SNORD38B Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD38B Gene

Pathways & Interactions for SNORD38B Gene

SuperPathways for SNORD38B Gene

Superpath Contained pathways
1 Viral mRNA Translation
genes like me logo Genes that share pathways with SNORD38B: view

Pathways by source for SNORD38B Gene

1 BioSystems pathway for SNORD38B Gene

Interacting Proteins for SNORD38B Gene

Gene Ontology (GO) - Biological Process for SNORD38B Gene

None

No data available for SIGNOR curated interactions for SNORD38B Gene

Drugs & Compounds for SNORD38B Gene

No Compound Related Data Available

Transcripts for SNORD38B Gene

mRNA/cDNA for SNORD38B Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD38B Gene

No ASD Table

Relevant External Links for SNORD38B Gene

GeneLoc Exon Structure for
SNORD38B
ECgene alternative splicing isoforms for
SNORD38B

Expression for SNORD38B Gene

mRNA expression in normal human tissues for SNORD38B Gene

genes like me logo Genes that share expression patterns with SNORD38B: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for SNORD38B Gene

Orthologs for SNORD38B Gene

Evolution for SNORD38B Gene

ENSEMBL:
Gene Tree for SNORD38B (if available)
TreeFam:
Gene Tree for SNORD38B (if available)

No data available for Orthologs for SNORD38B Gene

Paralogs for SNORD38B Gene

No data available for Paralogs for SNORD38B Gene

Variants for SNORD38B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD38B Gene

Variant ID Type Subtype PubMed ID
nsv461406 CNV Loss 19166990
nsv870815 CNV Loss 21882294

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for SNORD38B Gene

Disorders for SNORD38B Gene

Relevant External Links for SNORD38B

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
SNORD38B

No disorders were found for SNORD38B Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD38B Gene

Publications for SNORD38B Gene

  1. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M. … Bachellerie J.P. (J. Mol. Biol. 1996) 2 3 67
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD38B Gene

Sources for SNORD38B Gene

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