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SNORD37 Gene(RNA Gene)

Small Nucleolar RNA, C/D Box 37

GCID:
GC19M003982
GIFtS:
16
Genes Participants
UDN Logo

Aliases for SNORD37 Gene

Subcategory (RNA class) for SNORD37 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD37 Gene

  • Small Nucleolar RNA, C/D Box 37 2 3 5
  • RNA, U37 Small Nucleolar 2 3
  • RNU37 3
  • U37 3

External Ids for SNORD37 Gene

ORGUL Members for SNORD37 Gene

Previous HGNC Symbols for SNORD37 Gene

  • RNU37

Previous GeneCards Identifiers for SNORD37 Gene

  • GC19M003935
  • GC19M003936
  • GC19M003745

Summaries for SNORD37 Gene

GeneCards Summary for SNORD37 Gene

SNORD37 (Small Nucleolar RNA, C/D Box 37) is an RNA Gene, and is affiliated with the snoRNA class. Diseases associated with SNORD37 include Pulmonary Aspergilloma.

Additional gene information for SNORD37 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD37 Gene

Genomics for SNORD37 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for SNORD37 Gene

Promoters and enhancers for SNORD37 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH19I004204 Enhancer 1.1 Ensembl ENCODE 11.4 -222.3 -222334 0.9 PKNOX1 RB1 ZNF76 THRB ZSCAN9 RAD21 RFX5 SLC30A9 GTF3C2 TCF12 ANKRD24 SIRT6 CREB3L3 EBI3 CCDC94 SNORD37 TMIGD2 FSD1 GC19P004210 GC19P004195
GH19I004208 Enhancer 0.7 ENCODE 11.5 -226.2 -226187 1.4 BCOR ELF3 CTCF ZMYM3 RAD21 ADNP ZNF143 SMC3 ZNF391 PRDM10 GC19P004210 CCDC94 EBI3 SIRT6 ANKRD24 CREB3L3 SNORD37 TMIGD2 FSD1 GC19M004225
GH19I004207 Enhancer 0.6 ENCODE 11.5 -224.8 -224771 0.1 BCOR CTCF ZNF280D ZMYM3 RAD21 ZNF143 ZFP36 SMC3 KDM1A ZNF391 GC19P004210 ANKRD24 SIRT6 EBI3 CREB3L3 CCDC94 SNORD37 FSD1 TMIGD2 GC19P004195
GH19I004214 Enhancer 0.6 ENCODE 11.5 -232.3 -232347 0.2 HDGF ZFHX2 IKZF1 NBN EBF1 RBBP5 IKZF2 RUNX3 EGR2 CCDC94 ENSG00000267769 ENSG00000267030 SIRT6 ANKRD24 CREB3L3 SNORD37 FSD1 TMIGD2 FZR1
GH19I004209 Enhancer 0.5 ENCODE 11.5 -225.3 -225347 0.2 SMARCA5 ZNF217 CTCF CEBPB MLLT1 PRDM4 GC19P004210 EBI3 CCDC94 ANKRD24 SIRT6 CREB3L3 SNORD37 TMIGD2 FSD1 GC19P004195
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around SNORD37 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the SNORD37 gene promoter:

Genomic Locations for SNORD37 Gene

Genomic Locations for SNORD37 Gene
chr19:3,982,507-3,982,572
(GRCh38/hg38)
Size:
66 bases
Orientation:
Minus strand
chr19:3,982,505-3,982,570
(GRCh37/hg19)

Genomic View for SNORD37 Gene

Genes around SNORD37 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD37 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD37 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for SNORD37 Gene

Proteins for SNORD37 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for SNORD37 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD37 Gene

Domains & Families for SNORD37 Gene

Gene Families for SNORD37 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD37: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD37 Gene

Function for SNORD37 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD37 Gene

Localization for SNORD37 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD37 Gene

Pathways & Interactions for SNORD37 Gene

SuperPathways for SNORD37 Gene

PathCards logo More details on SuperPathways for SNORD37
No Data Available

Interacting Proteins for SNORD37 Gene

Gene Ontology (GO) - Biological Process for SNORD37 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for SNORD37 Gene

Drugs & Compounds for SNORD37 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for SNORD37 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for SNORD37 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD37 Gene

No ASD Table

Relevant External Links for SNORD37 Gene

GeneLoc Exon Structure for
SNORD37
ECgene alternative splicing isoforms for
SNORD37

Expression for SNORD37 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD37 Gene

mRNA expression in normal human tissues for SNORD37 Gene
mRNA expression by GTEx for SNORD37 Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD37 Gene:

SNORD37
genes like me logo Genes that share expression patterns with SNORD37: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD37 Gene

Orthologs for SNORD37 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD37 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia SNORD37 34
  • 94 (a)
 OneToOne
cow
(Bos Taurus)
 Mammalia SNORD37 34
  • 80 (a)
 OneToOne
dog
(Canis familiaris)
 Mammalia SNORD37 34
  • 80 (a)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia SNORD37 34
  • 79 (a)
 OneToMany
platypus
(Ornithorhynchus anatinus)
 Mammalia SNORD37 34
  • 79 (a)
 OneToMany
mouse
(Mus musculus)
 Mammalia Snord37 34
  • 78 (a)
 OneToOne
chicken
(Gallus gallus)
 Aves SNORD37 34
  • 70 (a)
 OneToMany
zebrafish
(Danio rerio)
 Actinopterygii SNORD37 34 34
  • 66 (a)
 ManyToMany
Species where no ortholog for SNORD37 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD37 Gene

ENSEMBL:
Gene Tree for SNORD37 (if available)
TreeFam:
Gene Tree for SNORD37 (if available)

Paralogs for SNORD37 Gene

No data available for Paralogs for SNORD37 Gene

Variants for SNORD37 Gene

Sequence variations from dbSNP and Humsavar for SNORD37 Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs145155508 likely-benign, not specified 3,982,410(-) G/A downstream_transcript_variant
rs200480185 likely-benign, not specified 3,982,033(-) C/T downstream_transcript_variant
rs750148265 uncertain-significance, not specified 3,982,849(-) G/A/T upstream_transcript_variant
rs145985140 benign, not specified 3,983,227(-) C/T upstream_transcript_variant
rs150801930 benign, not specified 3,982,296(-) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for SNORD37 Gene

Variant ID Type Subtype PubMed ID
nsv2392 CNV insertion 18451855
nsv953949 CNV deletion 24416366

Additional Variant Information for SNORD37 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
SNORD37

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD37 Gene

Disorders for SNORD37 Gene

MalaCards: The human disease database

(1) MalaCards diseases for SNORD37 Gene - From: DISEASES

Disorder Aliases PubMed IDs
pulmonary aspergilloma
- elite association - COSMIC cancer census association via MalaCards

Additional Disease Information for SNORD37

ATLAS of Genetics and Cytogenetics in Oncology and Haematology
genes like me logo Genes that share disorders with SNORD37: view

No data available for UniProtKB/Swiss-Prot and Genatlas for SNORD37 Gene

Publications for SNORD37 Gene

  1. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M … Bachellerie JP (Journal of molecular biology 1996) 2 3 58
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 58

Products for SNORD37 Gene

Sources for SNORD37 Gene

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