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Aliases for SNORD36C Gene

Subcategory (RNA class) for SNORD36C Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD36C Gene

  • Small Nucleolar RNA, C/D Box 36C 2 3
  • RNA, U36C Small Nucleolar 2 3
  • U36c Small Nucleolar RNA 3
  • U36c SnoRNA 3
  • RNU36C 3
  • U36c 3

External Ids for SNORD36C Gene

ORGUL Members for SNORD36C Gene

Previous HGNC Symbols for SNORD36C Gene

  • RNU36C

Previous GeneCards Identifiers for SNORD36C Gene

  • GC09P135192
  • GC09P135216
  • GC09U901181
  • GC09P135224
  • GC09P135230
  • GC09P135237
  • GC09P136220
  • GC09P136222
  • GC09P105718
  • GC09P136226
  • GC09P136230
  • GC09P136235
  • GC09P136249
  • GC09P136264
  • GC09P136286

Summaries for SNORD36C Gene

GeneCards Summary for SNORD36C Gene

SNORD36C (Small Nucleolar RNA, C/D Box 36C) is an RNA Gene, and is affiliated with the snoRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD36C Gene

Genomics for SNORD36C Gene

Regulatory Elements for SNORD36C Gene

Genomic Location for SNORD36C Gene

Start:
133,350,846 bp from pter
End:
133,350,913 bp from pter
Size:
68 bases
Orientation:
Plus strand

Genomic View for SNORD36C Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD36C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD36C Gene

Proteins for SNORD36C Gene

Post-translational modifications for SNORD36C Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD36C Gene

Domains for SNORD36C Gene

Gene Families for SNORD36C Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD36C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD36C Gene

Function for SNORD36C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD36C Gene

Localization for SNORD36C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD36C Gene

Pathways for SNORD36C Gene

SuperPathways for SNORD36C Gene

No Data Available

Interacting Proteins for SNORD36C Gene

Gene Ontology (GO) - Biological Process for SNORD36C Gene

None

No data available for Pathways by source for SNORD36C Gene

Transcripts for SNORD36C Gene

mRNA/cDNA for SNORD36C Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD36C Gene

No ASD Table

Relevant External Links for SNORD36C Gene

GeneLoc Exon Structure for
SNORD36C
ECgene alternative splicing isoforms for
SNORD36C

Expression for SNORD36C Gene

mRNA expression in normal human tissues for SNORD36C Gene

genes like me logo Genes that share expressions with SNORD36C: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD36C Gene

Orthologs for SNORD36C Gene

This gene was present in the common ancestor of mammals.

Orthologs for SNORD36C Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD36 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD36 36
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia SNORD36 36
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD36 36
  • 67 (a)
OneToOne
Species with no ortholog for SNORD36C:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD36C Gene

ENSEMBL:
Gene Tree for SNORD36C (if available)
TreeFam:
Gene Tree for SNORD36C (if available)

Paralogs for SNORD36C Gene

No data available for Paralogs for SNORD36C Gene

Variants for SNORD36C Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD36C Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV Deletion 23290073
nsv894057 CNV Gain 21882294
dgv8325n71 CNV Loss 21882294
nsv894076 CNV Loss 21882294
nsv894079 CNV Loss 21882294
nsv894080 CNV Loss 21882294

Relevant External Links for SNORD36C Gene

HapMap Linkage Disequilibrium report
SNORD36C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD36C Gene

Disorders for SNORD36C Gene

No disorders were found for SNORD36C Gene.

No data available for UniProtKB/Swiss-Prot for SNORD36C Gene

Publications for SNORD36C Gene

  1. Evolution of U24 and U36 snoRNAs encoded within introns of vertebrate rpL7a gene homologs: unique features of mammalian U36 variants. (PMID: 9703018) Gilley J. … Fried M. (DNA Cell Biol. 1998) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. (PMID: 22268729) Liu B. … Wang L.S. (J. Proteome Res. 2012) 3
  4. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M. … Bachellerie J.P. (J. Mol. Biol. 1996) 3

Products for SNORD36C Gene

Sources for SNORD36C Gene

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