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Aliases for SNORD36B Gene

Subcategory (RNA class) for SNORD36B Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD36B Gene

  • Small Nucleolar RNA, C/D Box 36B 2 3
  • RNA, U36B Small Nucleolar 2 3
  • U36b Small Nucleolar RNA 3
  • U36b SnoRNA 3
  • RNU36B 3
  • U36b 3

External Ids for SNORD36B Gene

ORGUL Members for SNORD36B Gene

Previous Symbols for SNORD36B Gene

  • RNU36B

Summaries for SNORD36B Gene

GeneCards Summary for SNORD36B Gene

SNORD36B (Small Nucleolar RNA, C/D Box 36B) is a RNA Gene, and belongs to snoRNA RNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD36B Gene

Genomics for SNORD36B Gene

Genomic Location for SNORD36B Gene

Start:
133,350,094 bp from pter
End:
133,350,168 bp from pter
Size:
75 bases
Orientation:
Plus strand

Genomic View for SNORD36B Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD36B Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD36B Gene

Regulatory Elements for SNORD36B Gene

Proteins for SNORD36B Gene

Post-translational modifications for SNORD36B Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD36B Gene

Domains for SNORD36B Gene

Gene Families for SNORD36B Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing
genes like me logo Genes that share domains with SNORD36B: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for SNORD36B Gene

Function for SNORD36B Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD36B Gene

Localization for SNORD36B Gene

No data available for Gene Ontology (GO) - Cellular Components for SNORD36B Gene

Pathways for SNORD36B Gene

genes like me logo Genes that share pathways with SNORD36B: view

Pathways by source for SNORD36B Gene

1 BioSystems pathway for SNORD36B Gene

Interacting Proteins for SNORD36B Gene

Gene Ontology (GO) - Biological Process for SNORD36B Gene

None

Transcripts for SNORD36B Gene

mRNA/cDNA for SNORD36B Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD36B Gene

No ASD Table

Relevant External Links for SNORD36B Gene

GeneLoc Exon Structure for
SNORD36B
ECgene alternative splicing isoforms for
SNORD36B

Expression for SNORD36B Gene

mRNA expression in normal human tissues for SNORD36B Gene

genes like me logo Genes that share expressions with SNORD36B: view

Orthologs for SNORD36B Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD36B Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia SNORD36 37
  • 71 (a)
ManyToMany
dog
(Canis familiaris)
Mammalia SNORD36 37
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm22879 37
  • 82 (a)
OneToOne
chicken
(Gallus gallus)
Aves SNORD36 37
  • 70 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SNORD36 37
  • 68 (a)
OneToOne
Species with no ortholog for SNORD36B:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD36B Gene

ENSEMBL:
Gene Tree for SNORD36B (if available)
TreeFam:
Gene Tree for SNORD36B (if available)

Paralogs for SNORD36B Gene

No data available for Paralogs for SNORD36B Gene

Variants for SNORD36B Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD36B Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV Deletion 23290073
nsv894057 CNV Gain 21882294
dgv8325n71 CNV Loss 21882294
nsv894076 CNV Loss 21882294
nsv894079 CNV Loss 21882294
nsv894080 CNV Loss 21882294

Relevant External Links for SNORD36B Gene

HapMap Linkage Disequilibrium report
SNORD36B

No data available for Sequence variations from dbSNP and Humsavar for SNORD36B Gene

Disorders for SNORD36B Gene

No disorders were found for SNORD36B Gene.

No data available for UniProtKB/Swiss-Prot for SNORD36B Gene

Publications for SNORD36B Gene

  1. Evolution of U24 and U36 snoRNAs encoded within introns of vertebrate rpL7a gene homologs: unique features of mammalian U36 variants. (PMID: 9703018) Gilley J. … Fried M. (DNA Cell Biol. 1998) 2 3
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3
  3. Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells. (PMID: 22268729) Liu B. … Wang L.S. (J. Proteome Res. 2012) 3
  4. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M. … Bachellerie J.P. (J. Mol. Biol. 1996) 3

Products for SNORD36B Gene

Sources for SNORD36B Gene

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