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Aliases for SNORD35A Gene

Subcategory (RNA class) for SNORD35A Gene


Quality Score for this RNA gene is


Aliases for SNORD35A Gene

  • Small Nucleolar RNA, C/D Box 35A 2 3 5
  • RNA, U35 Small Nucleolar 2 3
  • U35 Small Nucleolar RNA 3
  • U35 SnoRNA 3
  • RNU35A 3
  • RNU35 3
  • U35 3

External Ids for SNORD35A Gene

ORGUL Members for SNORD35A Gene

Previous HGNC Symbols for SNORD35A Gene

  • RNU35

Previous GeneCards Identifiers for SNORD35A Gene

  • GC19P054726
  • GC19P054733
  • GC19P054740
  • GC19P054747
  • GC19P054753
  • GC19P054760
  • GC19P054771
  • GC19P054784
  • GC19P049996
  • GC19P046371
  • GC19P049997
  • GC19P050012
  • GC19P050026
  • GC19P050045
  • GC19P049494
  • GC19P049501
  • GC19P049508
  • GC19P049517
  • GC19P049523
  • GC19P049529

Summaries for SNORD35A Gene

GeneCards Summary for SNORD35A Gene

SNORD35A (Small Nucleolar RNA, C/D Box 35A) is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for SNORD35A Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD35A Gene

Genomics for SNORD35A Gene

Regulatory Elements for SNORD35A Gene

Enhancers for SNORD35A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H050488 1.7 FANTOM5 Ensembl ENCODE dbSUPER 45.4 +999.3 999338 4.6 PKNOX1 KLF17 NFXL1 ZNF366 HSF1 SCRT2 EGR2 ZNF202 SP3 ZNF114 SNORD35A NUP62 POLD1 PTOV1-AS2 PRR12 SNORD35B IRF3 RPS11 ENSG00000268047 PNKP
GH19H048780 1.6 Ensembl ENCODE dbSUPER 46.3 -709.5 -709465 2.9 HDGF PKNOX1 FOXA2 ARNT ZFP64 ARID4B ZNF766 ZNF143 FOS SP5 PRR12 SNRNP70 PIH1D1 GRWD1 SNORD35A CYTH2 IRF3 SNORD35B ENSG00000268093 KDELR1
GH19H048871 1.7 Ensembl ENCODE dbSUPER 37.8 -615.2 -615161 8.8 FEZF1 YY1 SLC30A9 ZNF143 SP3 ZC3H11A MEF2D SSRP1 ZNF610 GLIS1 PRR12 SNRNP70 IRF3 GRWD1 SNORD35A PIH1D1 SNORD35B PTOV1-AS2 ALDH16A1 KDELR1
GH19H048632 1.7 Ensembl ENCODE dbSUPER 35.5 -854.7 -854699 7.8 MLX DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 GLIS1 NBN PRR12 SNRNP70 GRWD1 PIH1D1 SNORD35A RPS11 NOP53-AS1 NOP53 RPL18 ALDH16A1
GH19H048612 1.7 Ensembl ENCODE dbSUPER 33.4 -874.4 -874413 7.8 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC SSRP1 ZNF610 PRR12 PIH1D1 SNORD35A SNORD35B ALDH16A1 NOP53-AS1 KDELR1 RPS11 NOP53 SNORD23
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around SNORD35A on UCSC Golden Path with GeneCards custom track

Genomic Locations for SNORD35A Gene

Genomic Locations for SNORD35A Gene
86 bases
Plus strand

Genomic View for SNORD35A Gene

Genes around SNORD35A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
SNORD35A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for SNORD35A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD35A Gene

Proteins for SNORD35A Gene

Post-translational modifications for SNORD35A Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD35A Gene

Domains & Families for SNORD35A Gene

Gene Families for SNORD35A Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD35A: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD35A Gene

Function for SNORD35A Gene

Phenotypes From GWAS Catalog for SNORD35A Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for SNORD35A Gene

Localization for SNORD35A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for SNORD35A Gene

Pathways & Interactions for SNORD35A Gene

SuperPathways for SNORD35A Gene

No Data Available

Interacting Proteins for SNORD35A Gene

Gene Ontology (GO) - Biological Process for SNORD35A Gene


No data available for Pathways by source and SIGNOR curated interactions for SNORD35A Gene

Drugs & Compounds for SNORD35A Gene

No Compound Related Data Available

Transcripts for SNORD35A Gene

mRNA/cDNA for SNORD35A Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD35A Gene

No ASD Table

Relevant External Links for SNORD35A Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for SNORD35A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for SNORD35A Gene

NURSA nuclear receptor signaling pathways regulating expression of SNORD35A Gene:

genes like me logo Genes that share expression patterns with SNORD35A: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for SNORD35A Gene

Orthologs for SNORD35A Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD35A Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia SNORD35 34
  • 99 (a)
(Mus musculus)
Mammalia Snord35a 34
  • 80 (a)
(Canis familiaris)
Mammalia SNORD35 34 34
  • 79 (a)
(Monodelphis domestica)
Mammalia SNORD35 34
  • 77 (a)
(Ornithorhynchus anatinus)
Mammalia SNORD35 34 34 34
  • 74 (a)
(Bos Taurus)
Mammalia SNORD35 34 34 34
  • 71 (a)
(Gallus gallus)
Aves SNORD35 34
  • 57 (a)
(Anolis carolinensis)
Reptilia SNORD35 34 34
  • 55 (a)
(Danio rerio)
Actinopterygii SNORD35 34
  • 62 (a)
Species where no ortholog for SNORD35A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for SNORD35A Gene

Gene Tree for SNORD35A (if available)
Gene Tree for SNORD35A (if available)

Paralogs for SNORD35A Gene

No data available for Paralogs for SNORD35A Gene

Variants for SNORD35A Gene

Sequence variations from dbSNP and Humsavar for SNORD35A Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1001661897 -- 49,489,293(+) AGTAC(-/AAG)AAGAG intron-variant, upstream-variant-2KB
rs1001944060 -- 49,489,496(+) CAGTT(C/T)ATTAG intron-variant, upstream-variant-2KB
rs1006140111 -- 49,489,791(+) TTGCT(C/T)GTGAG intron-variant, upstream-variant-2KB
rs1007581932 -- 49,491,654(+) GGTTG(C/G)GGTGG intron-variant, downstream-variant-500B
rs1007633904 -- 49,491,471(+) GTACC(A/G)GGCAG nc-transcript-variant, downstream-variant-500B, reference, missense

Structural Variations from Database of Genomic Variants (DGV) for SNORD35A Gene

Variant ID Type Subtype PubMed ID
nsv9739 CNV gain+loss 18304495
nsv960858 CNV duplication 23825009
nsv953599 CNV deletion 24416366
nsv833863 CNV loss 17160897
nsv833862 CNV loss 17160897
nsv1160655 CNV deletion 26073780

Relevant External Links for SNORD35A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for SNORD35A Gene

Disorders for SNORD35A Gene

Relevant External Links for SNORD35A

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for SNORD35A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for SNORD35A Gene

Publications for SNORD35A Gene

  1. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M … Bachellerie JP (Journal of molecular biology 1996) 2 3 60
  2. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G … Montanini B (Genomics 2009) 3 60
  3. Gene organization and sequence of the region containing the ribosomal protein genes RPL13A and RPS11 in the human genome and conserved features in the mouse genome. (PMID: 10580157) Higa S … Kenmochi N (Gene 1999) 3 60

Products for SNORD35A Gene

Sources for SNORD35A Gene

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