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Aliases for SNORD33 Gene

Subcategory (RNA class) for SNORD33 Gene

snoRNA

Quality Score for this RNA gene is

3

Aliases for SNORD33 Gene

  • Small Nucleolar RNA, C/D Box 33 2 3
  • RNA, U33 Small Nucleolar 2 3
  • U33 Small Nucleolar RNA 3
  • U33 SnoRNA 3
  • RNU33 3
  • U33 3

External Ids for SNORD33 Gene

ORGUL Members for SNORD33 Gene

Previous HGNC Symbols for SNORD33 Gene

  • RNU33

Previous GeneCards Identifiers for SNORD33 Gene

  • GC19P054724
  • GC19P054731
  • GC19P054738
  • GC19P054745
  • GC19P054751
  • GC19P054757
  • GC19P054769
  • GC19P054782
  • GC19P049994
  • GC19P050010
  • GC19P050022
  • GC19P050043

Summaries for SNORD33 Gene

GeneCards Summary for SNORD33 Gene

SNORD33 (Small Nucleolar RNA, C/D Box 33) is an RNA Gene, and is affiliated with the snoRNA class. Among its related pathways are CFTR translational fidelity (class I mutations).

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for SNORD33 Gene

Genomics for SNORD33 Gene

Regulatory Elements for SNORD33 Gene

Genomic Location for SNORD33 Gene

Start:
49,490,615 bp from pter
End:
49,490,699 bp from pter
Size:
85 bases
Orientation:
Plus strand

Genomic View for SNORD33 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for SNORD33 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for SNORD33 Gene

Proteins for SNORD33 Gene

Post-translational modifications for SNORD33 Gene

No Post-translational modifications

No data available for DME Specific Peptides for SNORD33 Gene

Domains for SNORD33 Gene

Gene Families for SNORD33 Gene

HGNC:
  • SNORD :ncRNAs / Small nucleolar RNAs : C/D box containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with SNORD33: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for SNORD33 Gene

Function for SNORD33 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for SNORD33 Gene

Localization for SNORD33 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for SNORD33 Gene

Pathways for SNORD33 Gene

genes like me logo Genes that share pathways with SNORD33: view

Pathways by source for SNORD33 Gene

1 BioSystems pathway for SNORD33 Gene

Interacting Proteins for SNORD33 Gene

Gene Ontology (GO) - Biological Process for SNORD33 Gene

None

Transcripts for SNORD33 Gene

mRNA/cDNA for SNORD33 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for SNORD33 Gene

No ASD Table

Relevant External Links for SNORD33 Gene

GeneLoc Exon Structure for
SNORD33
ECgene alternative splicing isoforms for
SNORD33

Expression for SNORD33 Gene

mRNA expression in normal human tissues for SNORD33 Gene

genes like me logo Genes that share expressions with SNORD33: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for SNORD33 Gene

Orthologs for SNORD33 Gene

This gene was present in the common ancestor of chordates.

Orthologs for SNORD33 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SNORD33 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia SNORD33 36
  • 84 (a)
OneToMany
SNORD33 36
  • 85 (a)
OneToMany
SNORD33 36
  • 84 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SNORD33 36
  • 91 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Snord33 16
Snord33 36
  • 83 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SNORD33 36
  • 69 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia SNORD33 36
  • 72 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia SNORD33 36
  • 52 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea SNORD33 36
  • 64 (a)
OneToMany
Species with no ortholog for SNORD33:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for SNORD33 Gene

ENSEMBL:
Gene Tree for SNORD33 (if available)
TreeFam:
Gene Tree for SNORD33 (if available)

Paralogs for SNORD33 Gene

No data available for Paralogs for SNORD33 Gene

Variants for SNORD33 Gene

Structural Variations from Database of Genomic Variants (DGV) for SNORD33 Gene

Variant ID Type Subtype PubMed ID
nsv9739 CNV Gain+Loss 18304495
nsv912261 CNV Loss 21882294
nsv912262 CNV Loss 21882294
nsv912264 CNV Loss 21882294
nsv833862 CNV Loss 17160897
nsv912265 CNV Loss 21882294
nsv833863 CNV Loss 17160897

Relevant External Links for SNORD33 Gene

HapMap Linkage Disequilibrium report
SNORD33

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for SNORD33 Gene

Disorders for SNORD33 Gene

No disorders were found for SNORD33 Gene.

No data available for UniProtKB/Swiss-Prot for SNORD33 Gene

Publications for SNORD33 Gene

  1. Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs. (PMID: 8764399) Nicoloso M. … Bachellerie J.P. (J. Mol. Biol. 1996) 2 3
  2. Gene organization and sequence of the region containing the ribosomal protein genes RPL13A and RPS11 in the human genome and conserved features in the mouse genome. (PMID: 10580157) Higa S. … Kenmochi N. (Gene 1999) 2 3
  3. Eukaryotic snoRNAs: a paradigm for gene expression flexibility. (PMID: 19446021) Dieci G. … Montanini B. (Genomics 2009) 3

Products for SNORD33 Gene

Sources for SNORD33 Gene

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